Ctenopharyngodon idella (grass carp): 127522375
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Entry
127522375 CDS
T08802
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04260
Cardiac muscle contraction
cide04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127522375
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
127522375
04261 Adrenergic signaling in cardiomyocytes
127522375
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127522375
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127522375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Phage_holin_6_1
Motif
Other DBs
NCBI-GeneID:
127522375
NCBI-ProteinID:
XP_051768194
LinkDB
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Position
11:complement(26984022..27035145)
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AA seq
1033 aa
AA seq
DB search
MQRDRRIPLMHAHCLLLCVMSACWTALEVRGSQPEIPLSVVKLWASAFGGEIKSIASKYS
GSQLLQKKYKEYEKSVRIEEIDGAKVVKTLAQNMEEIFRKKAEATRRLVEAAEEAHLQHE
ENPDLQYEYFNAVLINEVDEDGNSVELGGEFLLEPNDHFNNLSVNLSLSVVQVPTNMYNK
DPDIVNGVYWSEALNKVFVDNFRRDPTLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFDC
RNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVASILDTLGDDDFFNIIAYNQEI
HYVEPCLNGTLVQADSTNKDHFKEHLDKLFAKGIGLLGNALSEAFTILNEINQTGRGSSC
SQAIMLITDGATEMYDDVFAKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFSQI
STLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALAQAHKQLGESKGPNPMTTVA
MPVFSTKNETKNQGILLGVVGTDIPIQELMKTIPKHKLGIHGYAFAITNNGYILTHPDLR
PLYQEGQKRKKPSYSSVDLSEVEWEDTEDVLRTAMVNRRTGTFSMEVKRTVDKGKRVLTM
HNDYYYTDIKGTPFSVGVALSRGHGKYFFKGNVSLEAGLHDLEQPDVALADEWTYCNTDE
HHEHRHLTQVQAIKLYMTSRKPHLKCDRELIQQVLFDAVVTAPLEAYWTGLALNKSENSD
KGVEIAFLGTRTGLSRTNLFVVPELLTNQDFLTAEDREGVFNADHFPLWYKRAAEQVPGT
FVYSIPFSSGGENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLEFFQRKFWTASRQCNAL
DGKCTISCDNEDIKCYLIDNNGFILVSEDTSQTNLFFGEVEGAVMNKLLLMGSFKKINLY
DYQALCKEYAGSSDSARTLLDPFTTVKWLLTELVIFLLEFNLYSWWNWDSTVKAQRAQRT
MMVPCDTEYPAFVSERTIKETTGNIDCNGCIRTFVIQQIPSSNLFMVVVENKCDCGSAAP
VTMEPIEIIYILS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggaccggagaattcctctgatgcacgcgcactgcctcctcttgtgtgtgatg
agcgcgtgctggacggcgctggaggtgcgggggtcccaaccggagatccccttatcagtg
gtgaaactctgggcttcagcgtttggtggtgaaataaaatcaatagcttcaaaatactca
ggatctcagctcttacagaagaaatacaaggaatatgagaaatctgtgcgaatagaggag
attgacggcgcaaaagtggtgaaaactttggcgcagaatatggaggaaatatttcggaaa
aaagctgaggccacacgaaggctcgtagaagcggcggaggaagctcatcttcagcatgag
gagaaccctgacctacagtatgagtatttcaacgcagtgctcataaacgaggtggatgaa
gatgggaacagcgtggagctgggaggagagttcctcctggaacccaacgatcattttaat
aacctatccgtcaacctcagcctcagcgtggtgcaggtgccaaccaacatgtacaataaa
gaccctgacattgttaacggcgtctattggtcagaagccttgaacaaagttttcgtggat
aacttcagaagggacccgacccttatttggcagtactttggaagcgctaaaggttttttc
cgacaatacccaggtgtgaaatggcatcctgatgaacatggtgtcattgcttttgactgc
aggaacagaaaatggtatatccaggcggccacctctcctaaagatgttgtgattctggtg
gatgtcagtggcagtatgaagggtttaagattgactatagccagacagacagtcgcttcc
atactggacacgctcggggatgatgacttcttcaacattattgcatacaaccaagagatc
cattatgtggagccctgtctaaacggcactctcgttcaagctgacagtactaataaggat
cactttaaagagcatctggacaagttattcgccaaaggaatcggactcctgggcaatgca
ctgagtgaggctttcactatcttaaatgagattaatcagaccggccgtggaagttcatgt
agtcaggcgatcatgctgataacagatggagccactgaaatgtatgatgatgtttttgcc
aaatataactggcctgagcgaaaggttcgtatattcccctacctcattggccgggaatct
gcgtttgctgataacctgaaatggatggcgtgcgccaataaaggttattttagtcagatc
tccactctggctgatgttcaggagaacgtgatgcggtatttgcatgtgatgagcagacct
aaagttatcgaccatgaacatgacacagtgtggactgaagcctacgtggacagcgcactc
gcgcaggcgcacaagcagcttggggagagtaaaggtccaaacccgatgaccacagtggcc
atgcctgtgtttagcaccaagaatgaaacgaaaaaccaaggcatcctgctaggcgttgtg
ggcactgacatccccattcaggagttaatgaaaaccatcccaaaacacaagctaggaata
catggatacgcatttgccattaccaataacggatacatcctgacacatcctgacctgagg
cccctgtaccaggagggccagaagaggaagaaacccagttacagcagcgtggacctgtcc
gaggtggaatgggaggacactgaggatgttttgcgcacagcaatggtgaacagacgaact
ggcactttttcaatggaagtaaaaagaacagtggacaaagggaaacgtgtcttaacgatg
cacaatgattattactacactgatattaaaggaactccatttagtgtaggtgtggcgctt
tcaagaggacatggaaaatacttcttcaagggaaatgtttcgctagaagccggtctacat
gatctggagcaaccagatgttgcccttgctgatgaatggacgtactgtaacacagatgag
catcatgagcatcgtcacctgactcaagttcaggccatcaaactgtacatgaccagccgt
aaaccacacctcaaatgtgacagagagctgattcagcaggttctgtttgacgctgtggta
accgctcccttagaagcgtactggactggactggctctcaataagtctgagaactctgat
aaaggggttgagattgctttcctcggcacccgcactggtctttccagaaccaacctgttt
gtggttcccgagctgctgaccaatcaagattttctcaccgctgaagacagggagggcgtc
tttaacgcagatcactttcctctgtggtataaaagagctgcagagcaggtgcccggcaca
ttcgtgtactccattcccttcagttcagggggtgaaaataagagtgtggttttggcaagc
actgctatccaactactcgatgacaggaagtctcctatagtggcagctgtgggaattcaa
atgaagctggaattctttcagaggaaattttggacggccagtcggcagtgtaatgctctg
gatggcaaatgtaccatcagctgtgataatgaggacattaaatgctatctcatagacaac
aatggcttcatcctggtctctgaagacacttctcagacaaacctcttctttggagaagtg
gagggagccgtcatgaacaaactgcttctgatgggctcgtttaaaaagattaatttgtat
gactatcaggctctctgtaaagagtatgcaggcagcagtgacagcgcacgcactttactg
gatcccttcaccactgtgaaatggctcttgacagaacttgtcatatttctgctggagttt
aacctgtacagctggtggaactgggactcgacagtcaaagcccagagagctcagaggaca
atgatggtgccatgtgacacagaataccctgcctttgtctctgagcgcaccatcaaagag
accacagggaacattgactgtaatggctgtatacggacgtttgtgattcagcagattccc
agcagtaacctgtttatggtggttgttgagaataaatgtgattgtggttccgccgctccg
gttaccatggagcccattgagatcatttatatcctttcataa
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