Ctenopharyngodon idella (grass carp): 127522403
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Entry
127522403 CDS
T08802
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127522403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127522403
Spliceosome [BR:
cide03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
127522403
Complex C
U4/U6.U5 tri-SnRNP related factors
127522403
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
127522403
NCBI-ProteinID:
XP_051768289
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Position
2:complement(35737656..35745024)
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AA seq
496 aa
AA seq
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MAVSQQQQQQQAVSKPAGGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPPDLIDWYDEFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQHMKSRPRKPPQRDEQEEEEEAAPATDSTRHG
DRRRSRTPKRSPSPRRSQNRSRSRSHHKEKHGASFDRELERERDRQRKEREGKDRDRDRD
RERDRERDRDRRRSRTPDRPTERRRSRSRERRRSHSASREKRNERKDRDKEREAESERER
SRRKDRDHHKDRERSKDKRSKGEGEERRHKEDKEDRKHREEKRSKRSRSRSRDRKHKTER
SSKKRSRSGSRSRQEAGEEKNRKRERSHSKERSHKRSRSKDRLHRRESSNGREHVKQERH
SPEPGERTNSVRAESP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagtcagcagcaacaacagcagcaggccgtgagcaaaccggccggcgggaaa
cacggcaacgttttgccgttatggggcaacgagaagactatgaacctcaacccgatgatc
ctgacgaacgtcctgtcatcgccctacttcaaggtccaactgtacgagctcaagacgtac
cacgaggtggttgacgagatctacttcaaggtcaaccatgtggagccatgggaaaaaggc
agcaggaagactgcggggcagacgggaatgtgcggaggggttcgaggagtcgggacgggt
ggaatcgtgtccactgcgttttgcttgctgtataaactatttacactgaaactgacccgc
aaacaagtgatgggtctcatcactcacacagattcgccctatatcagggcactgggcttc
atgtacatcaggtatactcaacctcctcctgacttgattgactggtatgatgagttcctt
gacgacgaggaggagttggacgtgaaggctggaggagggtgtgtaatgactgtcggagag
atgctccgctccttcctgaccaagctggaatggttctcaacattgttcccacgaatacct
gttcctgtgcagaaggcaatcgaccagcacatgaagagccgaccacgtaaacctccgcaa
agagatgagcaggaggaggaggaggaggcggcaccggcaactgattcaacaaggcatgga
gataggcgccgttccaggacacctaagagaagtccgagtcctaggagatcccaaaatcgt
tcccggagtcgcagccatcacaaagaaaaacatggtgcaagcttcgaccgtgaactggag
agagaacgagatcgtcagcgcaaagaaagggagggaaaggacagggatagagacagggac
cgagagagagacagggagagagaccgagatagacgacgttccagaacaccagaccgaccc
acagaacgtcgacgcagccgtagcagggaacgacgccggagtcacagtgccagccgggag
aagcggaatgagaggaaagatcgagataaagagagggaggcagagagtgagagagagcgg
agtcgcaggaaagacagagatcatcataaagatcgggagaggtcaaaagacaagagaagt
aagggagagggagaagagaggaggcacaaggaagataaggaggatagaaagcacagggaa
gaaaagaggagtaagcgctcaaggagcagaagcagagacaggaaacacaaaaccgagcga
tctagcaagaaacgctctcgctcaggcagcaggagcaggcaggaagcaggggaggagaag
aacaggaagcgggaacgcagccatagtaaggagcggtcacacaagcgcagtcgcagcaaa
gatcgcctgcaccgtcgagaatccagcaatggacgagaacatgtaaaacaagaacgccac
agtcccgaaccaggtgaaagaacaaacagtgttcgagcggagtctccctga
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