KEGG   Ctenopharyngodon idella (grass carp): 127522403
Entry
127522403         CDS       T08802                                 
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127522403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cide03041]
    127522403
Spliceosome [BR:cide03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    127522403
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    127522403
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 127522403
NCBI-ProteinID: XP_051768289
LinkDB
Position
2:complement(35737656..35745024)
AA seq 496 aa
MAVSQQQQQQQAVSKPAGGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPPDLIDWYDEFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQHMKSRPRKPPQRDEQEEEEEAAPATDSTRHG
DRRRSRTPKRSPSPRRSQNRSRSRSHHKEKHGASFDRELERERDRQRKEREGKDRDRDRD
RERDRERDRDRRRSRTPDRPTERRRSRSRERRRSHSASREKRNERKDRDKEREAESERER
SRRKDRDHHKDRERSKDKRSKGEGEERRHKEDKEDRKHREEKRSKRSRSRSRDRKHKTER
SSKKRSRSGSRSRQEAGEEKNRKRERSHSKERSHKRSRSKDRLHRRESSNGREHVKQERH
SPEPGERTNSVRAESP
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggcggttagtcagcagcaacaacagcagcaggccgtgagcaaaccggccggcgggaaa
cacggcaacgttttgccgttatggggcaacgagaagactatgaacctcaacccgatgatc
ctgacgaacgtcctgtcatcgccctacttcaaggtccaactgtacgagctcaagacgtac
cacgaggtggttgacgagatctacttcaaggtcaaccatgtggagccatgggaaaaaggc
agcaggaagactgcggggcagacgggaatgtgcggaggggttcgaggagtcgggacgggt
ggaatcgtgtccactgcgttttgcttgctgtataaactatttacactgaaactgacccgc
aaacaagtgatgggtctcatcactcacacagattcgccctatatcagggcactgggcttc
atgtacatcaggtatactcaacctcctcctgacttgattgactggtatgatgagttcctt
gacgacgaggaggagttggacgtgaaggctggaggagggtgtgtaatgactgtcggagag
atgctccgctccttcctgaccaagctggaatggttctcaacattgttcccacgaatacct
gttcctgtgcagaaggcaatcgaccagcacatgaagagccgaccacgtaaacctccgcaa
agagatgagcaggaggaggaggaggaggcggcaccggcaactgattcaacaaggcatgga
gataggcgccgttccaggacacctaagagaagtccgagtcctaggagatcccaaaatcgt
tcccggagtcgcagccatcacaaagaaaaacatggtgcaagcttcgaccgtgaactggag
agagaacgagatcgtcagcgcaaagaaagggagggaaaggacagggatagagacagggac
cgagagagagacagggagagagaccgagatagacgacgttccagaacaccagaccgaccc
acagaacgtcgacgcagccgtagcagggaacgacgccggagtcacagtgccagccgggag
aagcggaatgagaggaaagatcgagataaagagagggaggcagagagtgagagagagcgg
agtcgcaggaaagacagagatcatcataaagatcgggagaggtcaaaagacaagagaagt
aagggagagggagaagagaggaggcacaaggaagataaggaggatagaaagcacagggaa
gaaaagaggagtaagcgctcaaggagcagaagcagagacaggaaacacaaaaccgagcga
tctagcaagaaacgctctcgctcaggcagcaggagcaggcaggaagcaggggaggagaag
aacaggaagcgggaacgcagccatagtaaggagcggtcacacaagcgcagtcgcagcaaa
gatcgcctgcaccgtcgagaatccagcaatggacgagaacatgtaaaacaagaacgccac
agtcccgaaccaggtgaaagaacaaacagtgttcgagcggagtctccctga

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