Ctenopharyngodon idella (grass carp): 127522418
Help
Entry
127522418 CDS
T08802
Name
(RefSeq) red-sensitive opsin-1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cide04030
]
127522418
G protein-coupled receptors [BR:
cide04030
]
Rhodopsin family
Vision
Opsin
127522418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srt
Cytochrom_B_N_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
127522418
NCBI-ProteinID:
XP_051768337
LinkDB
All DBs
Position
11:20741911..20744461
Genome browser
AA seq
357 aa
AA seq
DB search
MAEQWGEAIFAARRKGDETTRETMFVYTNSNNTRDPFEGPNYHIAPRWVYNLATVWMFFV
VVASTFTNGLVLVATAKFKKLRHPLNWILVNLAIADLAETLLASTISVINQVFGYFILGH
PMCIFEGYTVSVCGIAGLWSLTIISWERWVVVCKPFGNVKFDGKWAASGIIFTWVWSAVW
CAPPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSFMIVLMITCCIIPLAIIILCYLAVY
LAIHAVAQQQKDSESTQKAEKEVSRMVVVMILAYCVCWGPYTFFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPIIYVFMNRQFRVCIMQLFGKKVDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcaatggggagaagcgatattcgcagccaggcgaaaaggagatgaaacaacg
agagaaacaatgttcgtatatactaacagcaataacaccagggatccctttgagggaccc
aactaccacattgcccctcgatgggtttacaacctagcaacagtctggatgttcttcgtg
gtcgtcgcctcgaccttcaccaatggcttggtgctggtggccacggccaaatttaagaag
ctccgtcaccctctcaactggatcttggtcaaccttgctatagctgatctagcagagact
ctgttggccagcaccattagtgtgatcaaccaagttttcggctactttatcctcggacat
cccatgtgtatttttgaaggctacactgtatctgtatgtggtatcgctggtctgtggtct
ttgactatcatctcttgggaaagatgggtggttgtctgcaaaccatttggaaatgtcaag
tttgatggtaaatgggcggctagtggcatcatcttcacctgggtttggtctgctgtctgg
tgtgcacctcccatctttggctggagcagatattggcctcacggtctgaagacctcctgc
ggccctgatgtcttcagtggaagcgaggaccctggtgtccagtccttcatgattgtccta
atgatcacttgttgtatcatccctctggccatcatcattctctgctacttggcagtgtac
ttggccattcatgctgtcgcccagcagcagaaggattctgagtccacacagaaggcagag
aaggaagtgtccagaatggtggttgtcatgatcctggcctactgtgtttgctggggtcct
tatacgttcttcgcctgctttgcagctgcaaacccaggctatgccttccaccccctggca
gcagccatgcctgcctactttgccaagagcgccaccatctacaaccccatcatttatgtc
ttcatgaaccgacaattccgcgtatgcatcatgcagctctttggaaagaaggtggatgat
gggtctgaggtgtccacatccaagacagaagtatcctctgtggctcctgcataa
DBGET
integrated database retrieval system
