Ctenopharyngodon idella (grass carp): 127522466
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Entry
127522466 CDS
T08802
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
cide03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127522466
03015 mRNA surveillance pathway
127522466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127522466
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127522466
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127522466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1811
Motif
Other DBs
NCBI-GeneID:
127522466
NCBI-ProteinID:
XP_051768440
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All DBs
Position
11:complement(13352101..13363202)
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AA seq
479 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESISNLQINEKDDKLKAEANGAKTEGNGNKTEEDDKEDKAAQS
LLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
TALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPENKWPQCLCVSPTYELALQTGK
VIEQMGKFYPEVQLVYAIRGNKLERGTKLQEQIVIGTPGTVLDWCQKLKFIDPKRIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKTCQMLLFSATFEETVWNFAKRIVPDPNIIKLKRE
EETLDTIKQYYVICNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQV
ALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSRFSMNILNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagattcgtgggcccaggctgtcgatgaacaagaagccgcagcggaatcgata
agcaacttgcaaataaatgaaaaagatgacaagctgaaagctgaagcaaatggggcaaag
acggaaggaaatggcaataagacagaagaggatgataaagaggacaaggcagcacaatca
ctgttgaataaactgatccgaagtaatctagtcaacacgaccaatcaagttgaagtcctt
cagagggatccgaactctccgctgtactcggtcaagtcatttgaagagctacgattgaaa
cctcagctgttgcaaggagtgtatgccatgggtttcaacaggccctccaaaatccaggaa
actgcattgcccatgatgctcgcagaacctccacagaatctcatcgctcagtctcagtca
ggcacgggtaaaacggctgcctttgtgctggccatgttaagtcacgtggaccctgaaaac
aaatggcctcagtgtctgtgtgtgtcccctacttatgagctggccctgcagaccggcaag
gtcattgagcagatggggaaattttaccctgaagtccaactagtgtatgccatcagagga
aacaaactggagcggggaacaaaactacaggaacagatcgtgattggcactcctggtact
gttttggattggtgccaaaagcttaaattcatcgaccccaaaaggatcaaggtttttgtc
ttggatgaggctgatgtcatgattgctacacagggccatcaagaccagagcattcgtatc
cagaggatgcttccaaaaacttgccagatgctcctgttctctgccacatttgaagaaact
gtgtggaactttgcgaagaggatcgttcctgaccccaacatcattaaacttaagcgtgaa
gaggagactctggacaccatcaagcagtactacgtcatctgcaacagcaaggaggagaaa
ttccaggctttgtgcaacatctacggagccattactatcgcacaggccatgatcttctgc
cacaccaggaaaacggccgggtggctggcaggagaactgtccagagaaggccaccaagtg
gcgctgctcagcggagagatgcaggtggaacagagggcagcggtcatcgaacgtttccgc
gatggcaaggagaaagtccttgttaccactaatgtctgtgctagaggtatcgatgtggag
caagtttcagttgtcatcaacttcgatctgccagtggacaaggatggcaaccctgacaat
gaaacatatctgcacagaatcgggcgtactgggagattcggcaagagggggttggcgatc
aacatggtggacagcaggttcagcatgaacatcctcaaccgcatccaggagcacttcaat
aagaaaatcgagaagctggacacagatgatttggatgaaattgagaaaatcgctaactga
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