Ctenopharyngodon idella (grass carp): 127522496
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Entry
127522496 CDS
T08802
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04020
Calcium signaling pathway
cide04218
Cellular senescence
cide04260
Cardiac muscle contraction
cide04261
Adrenergic signaling in cardiomyocytes
cide04270
Vascular smooth muscle contraction
cide04530
Tight junction
cide04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127522496
04020 Calcium signaling pathway
127522496
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
127522496
09144 Cellular community - eukaryotes
04530 Tight junction
127522496
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
127522496
09153 Circulatory system
04260 Cardiac muscle contraction
127522496
04261 Adrenergic signaling in cardiomyocytes
127522496
04270 Vascular smooth muscle contraction
127522496
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127522496
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127522496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
127522496
NCBI-ProteinID:
XP_051768498
LinkDB
All DBs
Position
11:complement(27046620..27139210)
Genome browser
AA seq
2094 aa
AA seq
DB search
MSANGPAPPAATPAAPPAASVPVSSVVPVGSLAQKKRQQYAKSKKQGSSANTRPQRALFC
LNLNNPIRRACISLVEWKPFDIFILIAIFANCMALAVYIPFPEDDSNSTNHDLETVEYAF
LIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIGLFSVVLEVLTKDGEKEAVGA
HPSVHGHGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLF
VIIIYAIIGLELFIGKMHATCYFQGTEIIAEDEPAPCAVNGHGRTCPINGTVCKEGWHGP
NGGITNFDNFMFAMLTVFQCITMEGWTDVLYWMNDAMGLELPWVYFVSLVIFGSFFVLNL
VLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEDDEESK
RNRVTLASLMEKKKKGFGWFSQSSDTHASMPASETESMNTENEKVEDEKATCCGPTCQKI
SKSKFSRRWRRWNRLCRRNCRLAVKSVPFYWLVIILVFLNTLTISSEHYNQPMWLTQVQD
VANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGIS
VFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQVFGGKF
NFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF
ICGNYILLNVFLAIAVDNLADAESLNTDNDDKKKGDEIDEIEDDPKVGEEDEKENAEEDE
EEPDVPAGPRPQISELVKKEKITPIPEGSAFFIFSNTNPIRVACHKLINHHIFTNLILVF
IMLSSASLAAEDPIRNFSARNIILGYFDYAFTAIFTVEIVLKMTTYGAFLHKGAFCRNYF
NLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTI
GNIMIVTTLLQFMFACIGVQLFKGKFYRCNDEAKSSPEECKGTYIMYKEGDVNQPIIQKR
HWHNSDFNFDNVLMAMMALFTVSTFEGWPALLYKAIDSNRENMGPIYNYRVEISIFFIIY
IIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQ
YKFWYVVNSTGFEYIMFVLILLNTICLAVQHYGQSELFNYVMDILNMVFTAVFTVEMVLK
LIAFKPRHYFTDAWNTFDALIVVGSVVDIAITEVNPTEAPQVDEAGNTEDSARISITFFR
LFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVD
HTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACMPGKLCDPESDYNPGEEMTCGSSF
AIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGR
IKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALK
IKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKF
KKRKEEGLVGVHPAQNNTAVALQAGLRTLHDIGPEIRRAISCDLQDDELVDFLPEEDEEI
YRRNGGLFGNHINHINGDTRRSSGHQTNATQRPLQVQPPPHYAHMEQPVGRLGRANAMAQ
QNHHRHHHHHHHHHHHNSYNKSPKSTNINLNNANMSSLPNGGHNRYYEHMPANGYPGSYY
GEYEKPRTPHGQRRRYYETYIRSQGSDRRRPTIRREEEYEEDRYSGEYYSGEEFYEDDSM
LSGDRYPNSDQEYETPRGYHHPDGYYDDDEQPLYHDPRRSPKRRLLPPTPQGNRRPSFNF
ECLRRQGSQDDLPHQRTALPLHLMQHQVMAVAGLDSSRAHRLSPTRSTRSWASPPLTPAS
KDRTPYYTPLIRVDRPLRDSASSSHSSIRKSSWYTDDPEYQQRNYSPVHLQVPPEYRNQY
HQKRGSATSLVEAVLISEGLGRYAKDPKFVAATKHEIADACEMTIDEMESAASHLLNGGI
TPVVNGVNVFPILGHRDYELQDVSASYSDEEPDPEPRPPYEEDLADEMICITTL
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacggccctgctccgcctgctgcgactcctgccgcgccccccgcagcttcc
gtgcctgtatcctcggtggtaccggtcggctcgctagcccagaagaagcggcagcagtat
gccaagagcaaaaaacagggcagttcggccaacacgcggccgcagagagctctcttctgc
ctcaacctcaacaaccccatccgccgggcctgtatcagccttgtggaatggaagccattt
gatatctttatattgatagcgattttcgccaactgcatggccttagctgtatacatcccc
tttcccgaggatgattccaactcaaccaaccacgacctggaaacagtcgaatatgccttc
cttatcattttcacgatcgaaaccttcttgaagatcatagcgtatggcttggtgatgcat
cagaacgcatatgtccgaaatggatggaacatgctggatttcgtcattgtcgttatagga
ttgtttagtgttgtcttggaagttttgaccaaagatggagagaaggaagctgttggagcc
catccgtccgtgcacggccacggagggaaaccaggaggtttcgacgtcaaagccctcaga
gcctttcgagtgctgcgaccgcttcgcctggtctcaggagtgcccagtttacaggtggtg
ctgaactccatcattaaagccatggttcctctcctccacatcgccctgctggttctgttt
gtcatcatcatctacgccatcatcggtttggagcttttcattggaaaaatgcacgctact
tgttattttcaagggacagagataatagcagaggatgaacctgcaccgtgtgctgttaat
ggtcatggtcgtacatgtcctatcaatggcactgtgtgtaaggagggctggcacggcccc
aacggaggcatcacaaacttcgacaacttcatgtttgccatgctcactgtgtttcagtgc
attaccatggagggctggacggatgtactctactggatgaatgatgctatggggttggag
ctgccctgggtgtactttgtgagcttggtcatcttcggctctttcttcgtcttgaacctg
gttctgggtgtgttgagcggagagttctctaaagagcgagagaaggcaaaagctcgtgga
gatttccagaagctacgggaaaaacaacagctggaggaagatctgaaaggttatctggac
tggatcacgcaggcggaagacattgaccctgagaatgaggaagatgatgaagaaagcaaa
cgcaaccgggttacattggccagcctcatggagaagaagaagaaagggtttggctggttc
agccagtcctctgacactcatgcgagtatgccggcgagtgagaccgaatccatgaataca
gagaatgagaaagtagaagatgagaaggcgacatgttgtggccctacatgtcaaaaaatt
tcaaaatcaaagttcagtcggcgctggcgtcgctggaaccggttgtgtcggagaaactgt
cgtttggctgtgaaatctgtgccgttctactggctggtgatcatcctggtgttcctcaac
actttgaccatctcatcagaacattacaaccagcctatgtggctcacacaagtacaggat
gtggccaataaagtgctgctggccctgttcacatgcgagatgttggtgaagatgtacagt
ctgggcctgcaggcttattttgtgtctctctttaatcgttttgactgctttgtggtgtgc
ggaggcatcacagagacgatcctagtggagcttgagatcatgtcacctctcggcatctca
gtgtttcgatgtgtacgacttctcaggatctttaaagtcacacgtcattgggcatctctc
agtaacttggtggcatctctcctgaactccatgaagtccatcgcatctctactgctgctg
ctgttcctcttcatcatcatcttcagcctcctcggtatgcaggtgttcggcggcaagttt
aacttcgacgagacacaaacaaagaggagcacctttgacaacttccctcaggccttgctc
actgtgtttcagattctgaccggtgaagactggaatgccgtcatgtacgatggaattatg
gcatacggtggcccatcatcatcaggaatgattgtgtgcatctacttcatcattctcttc
atctgtggaaactacattcttctgaatgtgttcttggctatcgctgtggacaaccttgca
gacgcagagtctctgaacacagacaatgatgataagaagaaaggtgatgaaattgatgaa
attgaagatgatcccaaggttggagaggaggatgagaaggagaatgcagaggaggatgaa
gaagagccggacgttcctgcggggccccgcccacagatctcagagctcgttaagaaggag
aaaatcactccaatcccagagggcagtgcgttcttcatctttagcaacacaaacccaatt
cgagtcgcctgccacaagctgataaaccaccacatcttcaccaacctcatcctcgtgttc
attatgctaagctccgcctccttggcagctgaggacccaatcagaaacttctctgcccgt
aatattatacttggttactttgactatgctttcacggctatctttactgtagagatcgtg
ttaaagatgaccacatatggcgcgtttctccacaagggggcgttctgcaggaactacttt
aatcttctagatctgctggtggttggcgtgtcgctggtgtccttcggaattcaatcgtca
gccatctcagtggtgaagattctgagggttctgagggtgctgcgtccactcagggccata
aacagagctaaaggactgaagcatgtggtccagtgtgtgtttgtggccatcaggactatt
ggaaacatcatgattgtcaccacactgctacagtttatgttcgcctgcattggtgtacag
ctcttcaaggggaagttttaccgttgtaacgatgaagccaagtccagcccagaggagtgc
aagggaacgtatatcatgtataaggaaggagatgtgaaccagccaatcattcagaagcgt
cattggcacaacagcgatttcaacttcgacaacgtactcatggccatgatggctcttttc
acagtgtccacatttgaaggctggccagcgttgctgtacaaggccatagactccaaccgg
gagaacatgggtccgatctacaactaccgtgtggagatttccatcttcttcatcatctac
atcatcatcatcgccttcttcatgatgaacatcttcgtgggtttcgtcatcgttaccttt
caggaacagggagagaaagagtacaagaactgtgagctggacaagaaccagcgccagtgt
gtggagtatgcattaaaagcgcgtcctctccggaggtacatcccaaagaacccgtaccag
tataagttctggtatgtggtgaactccaccggcttcgagtacatcatgtttgtcctgatc
ttactcaacaccatctgtcttgccgtgcagcactacggtcagtccgagctgttcaattat
gttatggacatcctgaatatggtcttcactgccgtcttcactgtggagatggtactcaaa
ctgatagccttcaaaccccggcattatttcactgacgcatggaacacatttgacgcctta
attgttgtcggtagcgtcgtagatattgctatcactgaagtcaaccccacagaggcacct
caggtggatgaggcggggaacacagaggacagtgctcgcatttccattaccttcttccgt
cttttccgagtgatgcgattggtcaagctgctgagcaggggggagggcattcgaaccctc
ctctggaccttcatcaagtccttccaggccctgccatatgtcgctttgctgatagccatg
ctcttctttatctacgctgtcattggaatgcaggtgtttgggaaaatcgccatggtggac
cacacgcaaatcaacaggaacaataactttcagacgttcccccaggctgtgcttctgctc
ttcagatgtgcaacaggtgaagcctggcaggagatcatgttggcatgtatgccagggaag
ctgtgtgatccggagtcagactataatcctggagaagagatgacttgtgggagcagcttc
gccatcatctacttcatcaccttctacatgctctgcgccttcctgatcattaacctgttt
gtggctgtcatcatggacaatttcgactatctgacccgtgattggtcgattctggggcca
catcatcttgatgaatttaaaaggatttggtcagaatatgatccagaggccaaaggcaga
ataaagcatcttgatgtagtgacgttgttacggcggattcagccgcctcttggttttggg
aaactctgtcctcatagagtcgcttgcaagaggctggtggctatgaacatgcctctgaac
agtgacggcaccgtcatgtttaacgctacactttttgctcttgtgagaactgcactgaag
atcaaaacagaaggtaacctagagcaggcgaatgaagagctgcgagccgtaattaagaag
atctggaagagaacaagcatgaaacttttggatcaagtggtgccccctgctggtgatgat
gaggtaacggtggggaagttctatgccactttcctgatacaggactactttaggaaattc
aagaaacgcaaagaggaaggcctggtgggcgttcacccagcacagaacaacacggccgtc
gccctgcaggctggcctccgtacgctgcatgacattgggccagaaatacgccgtgcgata
tcatgtgacctgcaggatgatgagctagtagactttttgccagaggaggacgaagaaatt
tataggcgaaacggaggactctttggcaaccacattaaccacataaacggagacacccgg
aggagctctggccaccagacgaacgccacacagcgccccctgcaggtgcagccgccccca
cattacgcccacatggaacaacctgtggggcgcctgggccgtgccaatgcaatggcgcag
caaaaccatcatcgccaccaccaccaccatcatcaccatcatcatcacaactcctacaac
aagtcgcccaagtctaccaacatcaacctaaacaacgccaacatgtccagtttacctaac
ggaggacacaatcggtactacgagcatatgcccgctaatggctacccgggatcgtattat
ggagaatatgagaagcccaggaccccacatgggcaaagaaggcgctactatgagacgtac
attaggtcgcagggcagcgacagaagacgacccactatacgccgcgaagaggagtatgaa
gaagatcgttactctggagagtactacagcggagaggagttttacgaagatgacagcatg
ctgtcgggtgataggtaccccaatagtgatcaggagtacgagacgccacggggttaccac
catcctgacggttactatgatgatgacgagcagcccctttatcacgatccacgtagatca
ccaaagagaagactgcttcctccaacaccgcaaggtaatcggagaccatcattcaatttt
gagtgtctgcgcagacagggcagtcaagatgatcttcctcaccagcgaactgctcttcca
ttacatctcatgcaacatcaggtgatggcggtagcgggtctagactccagcagggctcac
aggctttcacctactcgatctaccagatcgtgggcgtcacctcctctcactcctgcaagt
aaagacagaacgccgtactacacgccgctgatccgtgtggaccgtccgctgagggacagc
gcaagcagcagtcactcatccatcaggaagagttcatggtatacagatgatcccgagtac
cagcagaggaactactcacctgttcatctgcaggtcccaccggagtatcgaaaccagtac
caccagaagagaggtagcgctaccagcctggtagaggcggtcttgatatcagaaggactg
ggtcgatacgccaaggatccaaagttcgtggctgccacgaagcacgagatcgcggatgcg
tgcgagatgaccatcgacgaaatggagagcgccgccagccatctcctgaacggcggcatt
acgccggtagtcaatggcgtcaacgtgttccccatactgggccacagagactacgagctg
caagatgtctcggctagctacagcgatgaggaaccggaccccgaacccagaccgccatac
gaggaggacctggcagacgaaatgatatgcattaccactttatag
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integrated database retrieval system
