Ctenopharyngodon idella (grass carp): 127522497
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Entry
127522497 CDS
T08802
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127522497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127522497
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127522497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
Motif
Other DBs
NCBI-GeneID:
127522497
NCBI-ProteinID:
XP_051768515
LinkDB
All DBs
Position
2:16180676..16205857
Genome browser
AA seq
2346 aa
AA seq
DB search
MAALLQQTLERSEINKLPKAIQNKLEKVLSEQQTEIDSLKSQHERYKADCEQQYFNLEKK
LAESQEQFLSQSKEYHSIKEENSRLSEELKKLKDIEEEQGTTQESTPPRAKYEIEAENRE
LSRMLEKRSQEVENLSEDLKRLNDKLVETSTIKMELQLKLDELQSSEVSIQHREKRMEQE
KELLQNQNTWLNSELKSKTDELYTVSRDKGKEILELRCSLETKKEEVTRLQDQVNTLKKN
NENMQKSTEDLMNKLKEAKEQRASMEEKYRNELNANLRLCKLYKDAAADSEAKNAELNRA
VEELNKLLKEAMEANKGTEKKLAELQGVREKAESDLHEKVRNLEKELENANTRLAEFKRR
GVPALTEEELTNLSPTAAAVAKIVKPGMKLMELYNAFVEAQDQLHLEKLESKRVNKVLDE
IVLEVETKAPILKRQREEYENMQKSMTSLCAKLEQAMKEVHRLQKETDEANKRALGLERD
NQRSKRQLADMSEQVSVLLVEVEEARGNQVVREDLSSAVSSSSEVQGSRQVAFRSVQELQ
QQNQNLLAQIRDLEEQRERDQNQAKTARQTELEQSLEKVQKELEQIKEQQNHQKHLADSA
IRQRDMYRILLQTAGVELPPQGSEAGSQSTTPNRPGPMSTRSTPLRSAASESVQATQAKA
ALKQLNDAFITYKKEKAENDKLLNEQIERLRGQVSDLLSQKAKLSSQLEFAFKRYEMLQE
NVNGFRRETEALREKNQKMSATHQRHEQIIHTMTQDLREANEKLTMAELRVENIRKERDI
LKQVENRLSQEKESVLTEQRGQNLLLTNLKSIQLMTERSETETKQRYNNHIQRLEKEIIQ
LKKKLEQEVEQRHALERNQDAQLLEVKKQLEAQTALHQKTKELLRTAEQQATSMRQQLNN
DNLGTAPKQPVRTLPRVSAPGVPQQEVDELQARLQQAEEQNSDLKERLKNTTTNVEQYRS
MVLSLEESVNKEKQLAEQVRTSIDSQLKTARELNQQLEARLLEAEKEKLELQEEKMKAVE
SVEERVKELKRSVTDMQTELQDALQRAAAAVAQEQRATQDSKLQAKLAAEAQNKYERELM
LHAADVEALQTAKKQGQLSAQNLKQLEDKAQKAASELHQGRTNWEHQEKRLREELSKEQK
RAEELQKQNTMLHEQMENLSSKITASTQQQTAKESSLNISLNEEGKSHEQILDILRFVRR
EKEIAETRLEVAEVETLRYKQRMEYLEGELKELQDSLNAEREKLQVTTKTLTQQEDMMKR
MESMSALTETNKMLKNEKNRLEHELQQTKAKIRKLEADIKPLLDSNAELSEKSGMLQAEK
KLLEDDVKRLKARTQQLLSQQKDTDQEESKKLNSEREAHLKRIQQLTEETGKLKNEVARS
QASITTAQSQVQNLQDSLGKVTTERDSLKKELEAKTLDIQEKLKTITQVKKIGRRYKTQF
EELKEQHDKMVAEAASKPAQEQEDRQASVQEIQNLKSSLSQAQNRSSELETQLESIQKER
EVEVKSLQEQLAQVQPELNRLRAELQEKGNLEEQLRQQIADKEEKTKKAFMGAKQKINQL
NSVKEQLVKENEELKQQREELEVRMSALKSQYEGRLSRQERELRELREQQERHGEQRDEA
QEPGQSKVQEAQRSSDPRQITLKPTPTTDRGSASTSEPPTANIKPTPVAATPSKPSPIAG
SKSTPRASIRPMVTPAPVTTPTATVMPTTQVETQEALQSIEGPLEHVTVFGSTSGSVRST
SPNIQTTQPILSLQQNQATAFVQPTQQQASQEPATTIMEAVHSSQMERPSTSTAVFGTVS
ATAGSSVPKRVREEEQESSTEVSDTTQDDPTHPPINKKIRIIRRVGLEDASGTEESNDAM
GEASGEVQQPSDASEEAYPVLAEGDEESLSQSVPMDQVSESQPSESQISGQDSSEEYKHD
VIIIETDSGTEEEEEEQEGPGQYEDDDDDAEDDEDEDGDGGMAEAAEESNEGSGSADANE
AYEGDEAEGGGAADPGIDNEESQEASGSIQKQADSQSSGEASVSTLEAFPTEPVREHQPV
PSTTTSCLGPRLPQSPRRPHHTPPPRLNIHPIPELGPPIMQRQPGQSRRPSMSRAPQLTP
GIGSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMMPQASS
SHSDLSHLATHGGLGMYESPLFLPAHDEESGGRSVPTTPLQVAAPVTVFTESHPSDVSET
ASQSVPMVSTSTGSLTTPGEAVPGDDGDDVFVAEAESEGASSEACLEGQSELESTQPLDD
ASLPSTSQEPTSSSADTSTSTSTGQAKPASRLLPQHQLPRRSQLIRRGIDFPRGGRGRGL
NRGTPI
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacttcttcagcaaacactggagagaagtgagataaacaaactgccgaaagcc
attcagaacaagctcgagaaggttctgtcagagcagcagacggaaatagactcgctgaaa
tcacagcacgagcggtataaagcagactgtgagcaacagtactttaatcttgagaagaag
ctagctgagagtcaggagcagttcttgtcccaaagtaaagagtatcacagtattaaggag
gagaacagccgtctctccgaggagcttaagaagttgaaagatatagaggaagagcaggga
acaacgcaagagagtacgccaccaagagccaaatatgaaattgaggcagaaaaccgagag
ctctcacggatgcttgagaagagatctcaagaagtggaaaacctcagtgaggatctcaaa
cgtctcaatgacaaactcgtggagacgagcacaatcaagatggagctccagcttaaacta
gatgaacttcagtcatctgaggtttccattcagcatcgtgagaaacgaatggaacaagaa
aaggagcttctccagaaccagaacacatggctgaattcagagctgaagagtaagacagat
gagctgtacacagtatccagagacaagggcaaagagatcctggagctcaggtgctcttta
gagaccaagaaggaagaggtgaccagacttcaggaccaagtgaacacgctcaagaaaaac
aatgaaaacatgcagaagagtaccgaggatctgatgaataaactcaaagaggctaaagaa
caacgggcctccatggaggaaaagtaccgcaatgagctgaatgctaaccttagactctgt
aaattgtacaaggatgcagcagcagattctgaagccaagaatgctgaattgaacagagct
gttgaagagctcaacaaactgctgaaggaggcgatggaagcaaataaaggcacagagaag
aagctggcagaattgcagggtgtgagggagaaagcagagtctgatctacatgagaaggtc
aggaatctggagaaagagctggagaatgccaacacacgccttgcagaatttaaaaggaga
ggtgttccagctctcacagaagaggagctgacaaacctctcgccaactgcagctgcagtg
gccaagattgttaagccgggcatgaagctaatggagctgtataacgcctttgtggaggcg
caagaccagctgcacctggagaaactggagagcaagcgtgtgaacaaggttctggatgag
atagttctggaggtggagaccaaagctcccatcctgaaacgccagagagaggaatatgag
aacatgcagaagtccatgactagcctctgtgccaaactggagcaagctatgaaggaggtc
catcggctgcagaaggagacagatgaagccaataagagagctttagggctagagagagat
aatcagagatcaaagagacaactagcagacatgtctgaacaggtaagtgtgctgctggtg
gaggtggaggaggcacgtggtaatcaggtggtgcgtgaggacttgagctcggctgtgagc
agcagctctgaagtccagggctcacggcaggtggccttccgcagcgtccaagagcttcag
cagcaaaaccagaaccttctggcccagatcagagacctggaggagcagagagagagggat
cagaaccaggctaagactgccagacaaacagagttggaacagagtctggagaaagttcag
aaggaactggagcagatcaaagaacagcaaaaccatcagaagcatctggctgactctgcc
atccgacaaagagacatgtatcgtatcctgttgcagacagccggagttgagcttccacca
caaggttcagaggctgggtctcagtccaccactcccaacaggccaggacccatgtccacc
agatctacacccctgaggtctgcggcttcagaatctgtccaggcaactcaggctaaagca
gcacttaaacagcttaatgatgccttcataacatataaaaaggagaaggcagaaaacgac
aagcttctgaacgaacagattgagaggcttcgtggtcaagtgtctgatctgctttcacaa
aaggctaaactttcctctcagctggagttcgcatttaaacggtatgagatgcttcaggag
aatgtcaatggctttcgaagagagactgaagccctgagggagaagaatcaaaagatgagt
gccactcatcagagacatgagcaaatcattcacacaatgactcaagatctgagggaggcc
aatgagaaactaaccatggctgagttgcgcgttgagaatatccgtaaggaacgagacatt
ctgaagcaggtggagaacagactgtcccaggagaaggagtctgtcctgaccgagcagcgg
ggccagaatctcctgctcaccaacctcaaatccattcagcttatgacggagcgctctgag
actgagaccaagcagcgctacaataaccatatccagcgtctggagaaggagattatccag
ttaaagaagaaactggaacaggaggtggaacagagacacgcactggaacgcaaccaagac
gctcagctgctggaggttaagaagcagttggaggcacagacagcactacatcagaaaact
aaagagctgctaagaactgctgaacagcaggccacctccatgagacagcaactgaacaac
gacaaccttggcacagcacctaaacagcctgtcaggacgttacccagagtttcagctcct
ggcgttcctcagcaggaggtagatgagctccaagcacgtctacagcaggctgaagaacag
aactctgacctgaaggagcgtttgaagaataccaccaccaatgtagaacagtacagatcc
atggtgctcagcttggaggagtctgtaaacaaagagaagcagttggctgagcaggtacgg
acctccattgacagccagctgaaaactgcacgggagttgaaccagcagctggaagcccgg
ctgctggaagcagagaaggaaaagctggagcttcaggaggagaagatgaaagctgtagag
agtgttgaagaacgggtgaaggaactgaagaggagcgtgacggacatgcagacagagctg
caggatgccctgcagagagctgcggcagcagtggcccaggagcagagagccacacaggat
agcaaactacaggctaagctggctgcagaggctcagaataaatatgagcgagagctcatg
ctgcacgctgcggatgtggaagcccttcagacagccaagaaacagggacagttgtcagcg
cagaacctgaagcagctagaggataaggctcagaaagctgcatctgaactgcatcagggt
cgcacaaactgggaacaccaagagaagagactgagggaagaactttctaaagagcagaag
agagctgaggagctgcagaagcagaacaccatgctccatgagcagatggagaacctgagc
agcaagataactgcctccacccagcagcagaccgctaaagagagcagtctgaacatctct
ctgaacgaggagggcaaatctcatgagcagatcctggacatcctcaggtttgtacggcgg
gagaaggagattgctgagacccggttggaagtggcggaggtggagaccctgcgctataaa
cagcgcatggagtacctagagggagagctgaaggaactacaggacagcctaaatgcagag
agagaaaagctacaggtgacaacaaagaccttgacacagcaggaagacatgatgaagcgg
atggagagtatgagtgctctgaccgagaccaacaagatgctgaagaatgagaagaacaga
ctggagcatgaactacagcagactaaggccaagatacgtaagctggaagcagatatcaag
cccctactggactccaatgctgagctgagtgagaagagtggcatgttgcaggctgagaag
aaactcctggaggacgatgtcaagcgtttgaaggcccgcacacagcaactgctgagtcag
cagaaggacaccgatcaggaggaaagtaagaaactgaattctgagagagaggcccatctc
aaacgcatccagcagctcacagaggagacggggaagctcaagaatgaggtggccaggagc
caagcttcaatcactacagctcagagccaggtgcagaacctgcaggatagccttgggaag
gtcactactgaaagggatagtctgaagaaggagctggaggcaaagaccctggacatccag
gagaaactcaaaactatcacgcaggtcaagaaaataggccgtcgctacaaaacccagttc
gaagagctcaaagaacagcatgataagatggtggcagaggctgcttctaagccagcacag
gagcaggaagaccgtcaggcctcggtgcaggagattcagaacctgaagagttcattgagt
caggcgcagaacagatcctcagagctggaaactcagctggaaagcatacagaaggagcgt
gaagtggaggtgaagagcctgcaggagcagttggcacaggtgcagccagagctcaaccgt
ctgagagcagagctacaggagaagggtaacctggaggagcagctccgacagcagatcgct
gataaagaagagaagaccaagaaagctttcatgggtgccaagcagaagatcaaccagctc
aacagtgtaaaggagcagctggtgaaagagaatgaggagctgaagcagcagagagaggag
ctggaggtgaggatgagtgcactcaagtcacagtatgaaggccgtttgagccgacaggag
agagagctgagagaactccgtgagcaacaggagagacacggagaacagagagatgaagct
caggagccaggccagagcaaggttcaagaagcacagaggtcatcagatcctcgacagatc
actctcaaacccacacctactactgacaggggaagtgccagtacatccgagccgcccact
gctaacatcaagcccacaccagttgctgccacccccagcaagccttcgccaattgcaggg
agcaagtccaccccgagggcaagcattcgcccaatggtaacacccgctcctgtaaccacg
cccacagccacagtcatgcccaccacacaggtcgaaacacaggaagctctgcagtccata
gagggtccactggagcatgtgactgtctttggcagcaccagtggctcagtgcgctccacc
agccctaacatacagaccacgcagccaatcctcagcctgcagcagaaccaagccaccgct
tttgtccagcccactcagcagcaggccagtcaggaaccagcaaccaccattatggaggca
gtacatagctcacagatggagaggccgtccacttccactgctgtctttggtacagtgtca
gcaacagctggctcatctgtgcccaagcgagtgcgagaggaagagcaggagagctccact
gaggtgtccgacaccacacaggacgacccgacccacccacccatcaataagaagatccgc
atcataagaagagtgggcctggaggatgcttcaggtactgaggagagtaatgatgctatg
ggtgaagcttcaggagaagtccagcagccttctgatgccagtgaggaagcatatcccgtg
ttagcagagggagatgaagaatctttgtctcagtctgtcccaatggatcaggtgagtgag
tcccaaccatccgagtctcagatcagcggacaggactcatccgaggagtataagcatgac
gtcatcatcatagagacagatagtggcactgaggaggaagaggaggagcaggaggggcct
ggacagtatgaagatgatgatgatgatgctgaagatgatgaagatgaagatggtgatgga
gggatggcagaagcagcagaggagagtaatgaaggcagtgggagtgcagatgccaatgag
gcctatgagggggatgaggcagagggtggtggggcagctgatccaggaattgacaatgaa
gagagtcaagaagcatctgggtcaatccagaagcaagcggactctcagagcagtggtgaa
gctagtgtcagcaccttggaggccttccctactgagcctgtgagagagcaccagccagtc
cccagcaccaccacctcctgcttgggcccacggctgccccaatcccctcggagaccacat
cacaccccacccccacgtctcaacatccaccccatccctgagcttggacctcccatcatg
cagaggcagccaggacagagcagacggccctcaatgagtcgtgcaccccagctcacgcct
ggaatcggaagcatgcaacacttctttgatgatgatgacagaatggttccaagcactccc
acccttgttgtgccacaccgcacagacggctttgcagaggccattcattcccctcaggtg
gccggagttcctcgtttccgtttcggccctcctgaggacatgatgcctcaggctagctcc
tctcattctgacttgagccatctggccacacatggagggttaggcatgtatgaaagtcct
ctcttcctgcccgctcacgatgaagaatctggaggcaggagtgtccccaccacccctcta
caagtggctgctccagtgacagtgttcacagagagtcacccctctgatgtgtcggagaca
gcctctcagtcggttcccatggtgagcacgtccaccggcagtcttaccacaccaggggaa
gctgtcccgggagatgatggagatgatgtctttgtggccgaggctgagagtgaaggggcg
agtagtgaggcgtgtctagagggccagtcggagctggagtccactcagccgctcgatgat
gccagcctgccctccactagtcaagagcccacatccagctccgcagataccagcactagc
accagtactggtcaggccaagcctgcaagccgactccttcctcagcaccagctgccccgg
aggagccagctcatcaggagaggtattgattttcctcgtggaggccggggtcgaggactc
aacagaggcactcccatctaa
DBGET
integrated database retrieval system