Ctenopharyngodon idella (grass carp): 127522663 Help Entry 127522663         CDS       T08802                                  Name (RefSeq) collagen alpha-1(VI) chain   KO K06238   collagen type VI alpha Organism cide  Ctenopharyngodon idella (grass carp) Pathway cide04510   Focal adhesion cide04512   ECM-receptor interaction cide04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cide00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127522663  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     127522663   09142 Cell motility    04820 Cytoskeleton in muscle cells     127522663  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cide04147]     127522663    00536 Glycosaminoglycan binding proteins [BR:cide00536]     127522663 Exosome [BR:cide04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    127522663 Glycosaminoglycan binding proteins [BR:cide00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127522663  Hyaluronan   Extracellular matrix or blood plasma proteins    127522663 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_3 Motif Other DBs NCBI-GeneID:  127522663 NCBI-ProteinID:  XP_051768813 LinkDB All DBs Position 11:complement(25402383..25439342) Genome browser AA seq 1007 aa AA seqDB search MALNGYILTALCALWAGIFAQDVQKPSFKECPVDLFFVLDTSESVALRAKPPEFYINQIK NFTKTFINELKDTRQPCDRDVTWNSGALHYSDDIELVMGLVDLNTKRTDLKAAIDKIKYI GKGTYTDCAIKEGISELLRAGSHYHENKYIVVVTDGHPMTGYKEPCGGIQEAANEARQHA IKVFAVAISPDQEDTRLSVIATNVNYRQNFTAADNSHSAKLATIRTIINMITNETKDVCC SFDCNVPGGPPGLPGDPGQKGETGRPGMPGEKGDVGPPGNAGDPGPVGYQGMKGDQGSRG DKGDRGHKGFKGDKGAHGLDGIDGRKGEPGFAGLPGCKGSPGPDGLQGEPGPKGDPGQYG LKGEKGDPGKDGEPGRPGNYGPSGTKGDRGPRGANGDKGERGDDGPPGPDGPRGDRGTSG EKGEQGSRGNRGPRGEPGEPGPRGEQGREGSAGPNGDPGEPGRAGAPGYRGDEGPAGPEG SKGVRGIKGAPGDRGLMGERGDDGPQGNGTEGCHGFQGYPGPRGDSGVPGGKGTPGPKGD DGEPGDPGLDNDRPGPSGPKGAKGHRGPEGKPGPPGPPGPQGADECEILDIIMKMCSCCE CKCGPLDIVFIVDSSESIGASNFAIAKDFIVTVMDRLKFKQFGANESRIGVVQYSGAGVQ ESVQLGDPNIKTLIDLKQAVKNLRWIAEATYTGEALQFSLINMISKLVTERSVVIVLTDG RSDTQRDQVPLNVLCGKGLKVGGVGVMDYAKRIPNTEQLDELVCKDDPRKGFSFVLDNSG LLLDDSFLQNLTEKICEDKKCPTYTCPISFNADTDVLIMMDSSASVGSKNFEMTKEFSQM LAERFLSAEKGNFQVRVGVGQYSNNANLEAQFSTNVTQVVPQIAEAKFQNAGTQVTNALN FAIERFRGGRTRKKKLLVFSDGRSQGVNTIQIEKAVEQVNNADIELYVLAVGNQVNEAHL RTLVSRGRLYDNTYAYRHLFKVPDYHSMVTGVFYQTVSRKISLESRG NT seq 3024 nt NT seq  +upstreamnt  +downstreamnt atggcgcttaatggatatatattgaccgctctgtgcgcactttgggcagggatcttcgct caggatgtccaaaaaccctccttcaaagagtgtcctgtggatttgttctttgtgttggac acatctgaaagtgtggccctcagagccaaacctccagagttctacatcaaccagatcaag aacttcaccaagacctttatcaatgagctgaaagacacgcgacaaccttgtgatcgtgat gtgacgtggaactcaggagcgctgcactacagtgacgacattgagctggtgatgggatta gttgacctgaacacaaaacgcaccgacctgaaggctgccattgacaaaatcaaatacata ggcaaaggaacgtacaccgactgcgccatcaaggagggtatctctgagctgctccgagct ggctcccactatcatgagaataaatacattgtggtggtcacggatggtcaccctatgact ggctacaaggagccatgtggtgggatccaggaagctgctaatgaagcaagacaacatgcc attaaagtgtttgctgtggccatctcacctgaccaggaggacaccagactgtctgtcatt gccacaaatgtgaactacagacagaacttcaccgctgcagacaactcccactccgcaaaa ctggccactatacgcaccatcatcaacatgattacaaacgaaacaaaggatgtgtgctgc tcctttgactgcaacgtccctggaggccctcctggactccctggagacccaggacaaaaa ggagagactggaagaccaggcatgccaggagagaaaggagatgttggccctccgggaaat gctggtgatcccggtccagtcggttaccaaggaatgaagggagatcaaggatcaagaggc gataagggagatagaggtcataaaggattcaagggagacaaaggtgcccatggtcttgat ggcattgatggacgtaagggtgagccgggatttgctggccttccaggctgcaaagggtca ccggggccagatggcttgcaaggagaaccaggtcctaaaggagaccccgggcaatatgga ctcaaaggagaaaaaggagatcctggcaaagatggtgaaccaggaagacctggaaactac ggaccttcagggaccaagggagacaggggtcctcgtggtgccaatggtgataaaggcgag agaggagacgatggaccaccaggaccagatggcccaagaggagacagaggcacatctggt gagaaaggtgaacaaggttcccgtggtaacagagggcccagaggcgagcctggtgaacct gggccccggggtgagcaaggacgtgagggatcagcagggccaaacggagacccgggtgag ccaggaagggcaggggcaccaggttatcgtggcgacgagggtcctgctgggccagaggga tctaaaggggtcagaggaatcaaaggggccccaggagacagaggcctaatgggagagaga ggtgacgatggaccacaaggaaatggaactgagggttgccatggtttccagggttaccct ggccccaggggagattcaggagtgcctggtggaaaaggaacccctggacccaagggagat gatggagagccaggtgaccctggattagataatgacaggccaggaccatctgggcctaaa ggagccaaaggtcacaggggacctgaaggaaaacctggaccaccaggaccacctgggcct caaggagcagatgaatgtgagattctggatatcatcatgaagatgtgctcttgctgtgaa tgcaaatgcggacccctggacattgtcttcattgtggacagctctgagagtattggagct tctaactttgccattgctaaagacttcattgtgacggtaatggacagactcaagttcaaa cagtttggtgccaatgagtctcgtattggcgtggtgcagtacagtggtgctggtgttcag gagtccgtacagcttggtgaccccaacattaagaccctgatagacctaaaacaagctgtg aaaaacttgcgctggatagctgaagccacgtacactggagaagctctgcagttctctcta ataaacatgattagcaagctagtgacggagaggagtgtggtcattgtcctaactgatgga cgctctgacacccagagggaccaagtacccctaaacgtgctgtgtggcaagggactgaag gttggtggtgttggagtcatggattatgcaaaaaggattcccaatacagaacagcttgat gagcttgtgtgtaaagatgatcccagaaaaggtttctcctttgtcctggacaacagtggt cttcttctggatgacagcttcctgcaaaacctgactgagaaaatctgtgaagacaagaag tgtcccacttatacttgtccaatttcatttaatgccgacaccgatgtcctcatcatgatg gacagctcagccagcgtgggctccaagaacttcgagatgaccaaggaattctcacagatg ttggctgagcgctttctgtcagcagaaaaaggaaacttccaggtccgggttggcgttggc cagtacagcaacaatgccaacttggaggctcaattttccacaaacgtcacccaggtggtc cctcaaattgcagaagccaagttccagaatgcaggtacacaagtaacaaacgctctcaac ttcgccatcgagcgcttcaggggtggcaggacaaggaagaagaagctgctggtgttttcg gatggtcgttcccaaggcgtcaacaccatccagattgagaaagccgtggagcaggtgaac aacgcggatattgagctgtatgtgctggccgtgggaaatcaggtgaacgaggcccacctg cgcaccctggtgagccgaggccggctgtatgacaacacgtacgcctaccgccaccttttc aaagtacccgactaccactcaatggtcactggggtcttttaccaaactgtctcgcgcaag atttccctggagtcgagggggtga

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