Ctenopharyngodon idella (grass carp): 127522849 Help Entry 127522849         CDS       T08802                                  Name (RefSeq) collagen, type II, alpha 1b   KO K19719   collagen type II alpha Organism cide  Ctenopharyngodon idella (grass carp) Pathway cide04510   Focal adhesion cide04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:cide00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127522849  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     127522849  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cide00536]     127522849 Glycosaminoglycan binding proteins [BR:cide00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127522849 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  127522849 NCBI-ProteinID:  XP_051769133 LinkDB All DBs Position 11:complement(15898519..15949402) Genome browser AA seq 1487 aa AA seqDB search MILSADSRTLLLFVATLFAFLAVVKCQVEVEQDPGSCTHDGQSYSDKDVWKPEPCRICVC DTGSVLCDDIICEELKDCAKPEIPFGECCPVCAGDQPSSPGLPGAKGQKGEPGDITDVVG PRGPAGPMGPPGEQGPRGERGEKGEKGSPGPRGRDGEPGTPGNPGPPGPPGPNGPPGLGG NFASQMAGGFDDKAGAAQMGVMQGPMGPMGPRGPPGPNGSPGPQGFQGNPGEAGEPGSSG PMGPRGPPGPSGKPGDDGEPGKPGNSGERGPPGPQGARGFPGTPGLPGIKGHRGYSGLDG AKGESGAVGAKGESGSPGESGAPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGSAGPPG PVGPSGASGFPGSPGAKGEAGPTGARGPEGAQGPRGESGVPGSPGPSGVSGNPGTDGIPG AKGSVGAPGIAGSPGFPGPRGPPGPQGATGPLGPKGQSGDPGLAGFKGEAGPKGEIGSAG LQGAPGPAGEEGKRGPRGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGAAG VSGPKGASGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAAGEDGRPGPPGPQGVRG QPGVMGFPGPKGGNGEAGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQG QPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGVTGPRGERGFPGERGGAGPQGLQG PRGLPGTPGTDGPKGGVGPGGAPGAQGPPGLQGMPGERGTSGIPGPKGDRGDNGEKGPEG APGKDGARGLTGPIGPTGPAGPNGEKGESGPAGPSGAAGTRGVPGDRGETGPPGAAGFAG PPGADGQPGIKGEQGEGGQKGDAGAPGPQGPSGAPGPQGPTGVSGPKGARGAQGPPGATG FPGAAGRVGPPGPNGNPGPAGPAGPPGKDGPKGVRGDGGPPGRPGDAGLRGSAGPAGEKG DPGEDGPPGPDGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGSGDRG PPGPVGAPGMTGAAGEPGREGNPGSDGPPGRDGSAGIKGDRGDTGPAGAPGAPGGSGAPG PVGPTGKQGDRGEAGPKGPAGSPGPAGARGMPGPQGPRGDKGEAGDSGERGQKGHRGFTG LQGLPGPPGQPGDQGASGPSGPGGARGPPGPVGPAGKDGANGSPGPIGPPGPRGRSGETG PSGPPGNPGPPGLPGPPGPGIDMSAFAGLSQLEKGPDSYRADQAAEGSRQNDAEVDATLK SLNNQVESIRSPDGTKKSPARTCRDLKLCHPDWKSGEYWIDPNQGCTVDAIKVFCNMETG ETCVYPKPANIPRKNWWTTKGAERKHVWFGEAMNGGFHFGYGDDNLAPNTASIQMTFLRL LSTEASQNLTYHCKNSIAYMDEASGNLKKALLLQGSNDVEIRAEGNSRFTYSVLEDGCKR HTGKWSKTVIEYKSQKTSRLPIVDIAPMDIGGAHQEFGVDVGAVCFL NT seq 4464 nt NT seq  +upstreamnt  +downstreamnt atgatcctgtcggcggattcaaggactttactgctatttgtggcaacactattcgcattt ttggccgttgtcaaatgccaagtggaggttgaacaagatccaggcagctgcacgcacgat ggccagtcatatagtgacaaggacgtgtggaaacccgagccgtgtcgcatttgcgtttgc gacaccggctcggtcctgtgcgacgatatcatctgcgaggagctgaaagactgtgccaaa cctgagatcccgtttggggagtgctgcccagtctgtgccggtgaccagccttcctcccct ggcttgccaggtgctaagggacaaaaaggggaaccaggagacataacagatgttgtggga ccgaggggaccagccggtccgatgggaccaccaggagaacaagggcctcgcggagagaga ggagagaagggggagaagggaagtccaggcccccgtggaagagatggtgagccgggaacc cctggaaaccccggccctcctggaccacccggtccaaacggacccccaggcctcggtgga aactttgcctctcagatggctggtggatttgatgacaaagcaggagcagcacagatggga gtgatgcagggaccaatgggtccgatgggtccacgaggaccaccaggccccaatggatct cccggcccacaaggatttcaaggcaaccctggagaagccggagagcccggatcatccggc ccaatgggtcctcgtggccctcctggcccctcaggaaaaccaggagatgatggcgaacct ggcaaacctgggaacagtggtgaacgtggacctcccggacctcagggagctcgtggattc ccaggaacaccaggtctacctggaatcaagggacacagaggatattcaggtctcgatggt gctaaaggagagtctggagccgttggggcaaaaggtgagagcggctctcctggagaaagc ggtgctcctggaccgatgggtccacgcggtttgcctggtgaaagggggcgtccgggaccg tctggagctgctggtgctcgtggaaatgatggtttgcccggctctgctggtcctcctggt ccagttggtccgtctggagcttccggtttcccaggatcccctggtgcgaagggcgaagca ggacctaccggagcccgtggacccgagggagctcaaggaccccgtggagagtcaggtgtc cctggatctccaggaccatctggagtctctggtaaccctggtactgacggcatccccgga gctaaaggatcagtgggtgctcccggtattgctggctctcctggttttccaggccctcgc ggccctcctggaccgcagggagcgacgggtcctctggggcccaagggacagtctggtgat ccgggtctcgcagggttcaaaggtgaagctggtcccaaaggagaaattggtagcgccggt cttcaaggtgcccctggccctgccggagaggaaggtaaacgaggacccagaggagagcct ggtgctgctggacccgtcgggccgcctggagagagaggagctcctggtaatcgaggtttt cctggacaagatggtctggctggtccaaagggcgctccgggtgagcgtggagctgcgggc gtatcggggcctaagggagccagcggagatccaggacggcccggagaaccgggtctgcct ggtgcaagggggctgacgggacgtcccggtgatgccggtccacagggcaaagtcggtccc tctggcgctgctggtgaagacggccgtccgggacccccgggacctcagggtgttcgcggt cagcctggagtgatgggattccctggacccaagggtggcaatggtgaggctgggaaggct ggagagaagggactcgctggagctccgggtttgcgtggtctgcctggtaaagatggtgag acgggtgctgctggaccgcctggacctgctggtcccgcaggagagagaggagagcagggt cagcccggaccatcgggcttccagggtctgcccggaccccctggtccccctggtgaagga ggtaaacccggtgatcagggtgttccaggagaggctggagccgcaggggtcactggaccc cgaggtgaacgtggtttcccaggagagagaggaggtgcggggccgcagggcctccagggg cctcgtggtttgccaggaactccaggaaccgacggacccaagggcggcgtcggtccgggg ggagctcccggtgctcagggacctccgggattacagggaatgcctggagagagagggacc tctgggattcctggaccaaagggtgacagaggtgacaatggtgagaaaggacctgaagga gctcctgggaaagacggcgcaagaggtttaactggtccaattggtcctacgggtcctgcg ggacccaacggtgaaaagggagaatctggtccggcggggccgtctggagctgctggtact cgcggtgttcctggtgaccgaggagagactggtcctcctggtgctgctggttttgctggt ccacctggtgcagatggacagcctggcattaagggagagcagggtgaaggtggacagaag ggtgatgccggtgcaccgggccctcaggggccttctggagctccaggtcctcagggacca actggtgtgtctggaccgaaaggggctcgtggtgctcaaggacctccaggtgccacaggt ttccctggagccgcaggtagagttggacctcctggtcccaatggtaacccgggtcccgct ggtcctgctggtcctcctggtaaagatggtccaaagggtgtgcgtggtgacggtggtcct cctggaagacccggtgacgctgggttgcgtgggtcagctggtcctgctggcgagaaggga gatcctggagaagatggtcctcccggtccagatgggccgtcaggtcctcagggtctggct ggtcagcgtggaattgttggactccctggacagcggggtgaaagaggtttccccggcctg cctggaccctctggtgagcctgggaaacaaggagctcccggaggatctggagaccgtgga ccacctggaccagtgggagcgccgggtatgaccggagctgctggagagcccgggagagag ggcaatcctggatctgatggtcctcctggccgagatggttctgcgggaataaagggtgac agaggcgacactggtccagctggtgctcctggtgctccgggtggttctggtgcccctggt ccagtcggacccactggtaaacagggagacagaggagaggccggacccaaaggacctgct ggatctccagggcctgctggagctcggggaatgcctggaccacaagggccacgtggagat aagggagaagctggcgactcaggtgaaagaggacagaaaggacatagaggtttcaccggt cttcaaggtctgcctgggcctcctggccagcctggtgaccaaggtgcttctggaccttct ggacccggtggagcaagaggacccccaggccctgttggtccagctggaaaagatggagca aatggttcgcctggacctattggaccccctggacctcgtggtcgttctggagagactggg ccatccggtccccctggaaatcctggaccccctggtcttcctggcccaccgggacctggc atcgacatgtctgcttttgctggtctgtctcagcttgaaaagggtcctgattcctacagg gcagaccaagctgcagaaggcagccgtcagaatgatgccgaggtggatgccactctgaaa tccctgaacaaccaggtcgagagcattcgtagccctgacggtactaaaaagagccctgcc cggacctgcagagacctgaaactctgccacccagactggaagagcggtgaatactggatt gatcctaaccagggctgcaccgttgatgctatcaaggtgttctgcaacatggagaccggc gagacttgcgtctatccaaaacccgccaacatcccacgcaagaactggtggactaccaag ggtgctgaacgcaaacatgtttggttcggagaagccatgaatggtggattccattttggc tacggagatgacaatctggcacctaatacagcaagtattcagatgaccttcctaagactg ctgtccacagaggcctcgcagaacctcacctaccactgcaagaacagcatcgcctatatg gatgaggccagtggcaacctgaagaaggctcttctgctgcaaggatccaatgatgtggag atccgagctgagggcaacagtcgcttcacatatagtgttcttgaggatggttgcaagaga cacacaggaaaatggagcaaaacggtaattgagtacaaatcacagaagacttcacgccta cccattgtggacatcgcacctatggatattggaggagcacatcaggagtttggagtggat gtgggagccgtctgtttcttgtaa

DBGET integrated database retrieval system