Ctenopharyngodon idella (grass carp): 127522899
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Entry
127522899 CDS
T08802
Name
(RefSeq) retinoic acid receptor gamma-B isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127522899
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cide03310
]
127522899
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127522899
Nuclear receptors [BR:
cide03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
127522899
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127522899
NCBI-ProteinID:
XP_051769202
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Position
11:complement(3268715..3336723)
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AA seq
492 aa
AA seq
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MATNRERPVSHMTGFYPFAFSSMRNHSPFDLLANGSLFGRFGADLPKEMAALSVETQSTS
SEEMIPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRD
KNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSGELEE
LVNKVSKAHRETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEFAKRL
PGFTSLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLT
DLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPHRVDQLQEPLLEALKIYARRR
RPNKPHMFPRMLMKVTDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFEENSDS
KDSAAAAPLPPPAIQAIKRERDEESTLEDEEDEEDECAEEGRDRAGDSEDEEWGLLQVDM
GGARKSATGRAQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaatagggagaggcctgtgagtcatatgacagggttctacccctttgccttc
agttcaatgcgaaaccactccccctttgatcttctggccaatggcagcctctttggacga
tttggggcggaccttcccaaagaaatggcagctctgtcggtggagacccagagcacaagc
tcagaggagatgattcccagttctccttctccaccccctcctcctcgtgtctataaaccc
tgctttgtgtgccaggacaaatcttctggctatcattacggagtcagctcttgtgagggc
tgcaaggggtttttccgtcgcagtatccagaagaacatggtgtacacctgccacagagac
aaaaactgccagatcaacaaggtgacacgcaaccgctgtcagtactgccgactgcagaag
tgctttgaggttggcatgtctaaggaagcggtgcggaacgacaggaataagaaaaagaag
gatgtaaaagaggaggtggttcttccagaaagctacgagctgagtggagaactggaagaa
ctggttaacaaagtcagcaaagcgcacagggaaaccttcccttcgctctgtcagctcgga
aaatacacgactaactccagtgcggatcacagggttcagctggatcttggactgtgggat
aagttcagtgagctctctacaaagtgcattataaagattgtggagttcgccaaacgtctg
ccaggttttacttcactcaccattgcagaccagatcaccttactgaaatctgcctgcctt
gacatactgatgttgcggatttgtactcgctacactccagagcaggacactatgaccttc
tcggatgggctgaccctcaacagaacacagatgcacaacgctggttttggtccactcaca
gacctggtgtttgctttcgctgggcagctcctgcctctggagatggacgacacagagaca
gggctccttagcgccatctgcctcatctgcggagaccgcatggacctggaggagcctcat
cgggtggatcagctacaggagcctctgctagaggcattaaagatctacgctcgccgccga
cgccccaacaaacctcacatgttcccacggatgttgatgaaggttactgacctccgaggc
atcagtactaaaggagcggagcgagccatcactctgaagatggagatcccaggcccgatg
cctcctctgatcagagagatgctggagaacccggaggcctttgaggagaactctgactct
aaagacagtgcagctgccgcccccctgccgcctcccgccatccaggccatcaaacgcgag
agggacgaggaatccaccctggaggatgaagaagatgaggaggatgagtgtgcggaggag
ggacgagacagagcaggggacagtgaggatgaggaatggggactcctgcaagtggacatg
ggtggagctagaaagagtgcgacaggaagagcgcagtga
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