Ctenopharyngodon idella (grass carp): 127522919
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Entry
127522919 CDS
T08802
Name
(RefSeq) CXXC-type zinc finger protein 1b
KO
K14960
COMPASS component SPP1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127522919
03036 Chromosome and associated proteins [BR:
cide03036
]
127522919
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
127522919
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
127522919
COMPASS/SET1 complex (yeast)
127522919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
127522919
NCBI-ProteinID:
XP_051769249
LinkDB
All DBs
Position
11:20780377..20785058
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AA seq
564 aa
AA seq
DB search
MDSEMSDMDQTPAMDNTVVDGENAPLYCICRKPDINCFMIGCDNCNEWFHGHCINVTEKM
AKAIREWYCQQCQKMDPSLSIRYRKKNRDKDNEPERVEKRSSTPEYKIDKRRGSKVKRSA
RMCGECEPCTRTEDCGHCDFCKDMKKFGGPNKIRQKCRLRQCVVRARKMLRVRDEEFSLR
ERKDNIMHRDRRYLDDYDENDMEPYEHYKDRNASWGSDDDEDGPVYSPVPRKKAIKVKHV
KRRDKKFDKKKESRRHKQKQKHRDRLRHSERGDGRHGGDTQQCLGPNCIEPARPNSKYCS
EDCGMKLAANRIYEILPQRIQQWQQSPCVAEEQGKKQLERIRREQQAARMRLAEMERRFH
ELEGIIAKAKQQVVQQDEDVNETDSEDTDLQIFCVSCSHPVNPKVALRHMERCYAKYESQ
TSFGSIFPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRNV
FEPTGEYCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGL
LALMLHQTIQHDPLTTDLRSNKDR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgagatgtctgatatggaccagactccagctatggacaacactgtagtagat
ggagagaatgctcctctctactgcatttgtcgaaaaccagacataaactgcttcatgatc
ggttgtgacaactgcaatgagtggttccatggtcactgtataaatgtgacagagaagatg
gccaaagctatcagggagtggtactgccaacagtgtcagaaaatggatccgtctctttca
atacgttaccggaaaaagaatcgtgataaagacaatgagccagaaagggttgaaaaacga
tccagcactccagagtacaagatcgataagcgccgtggttctaaagtgaagcgatctgcc
cgtatgtgtggtgaatgtgaaccctgcactaggactgaagactgtggtcattgtgacttc
tgtaaagacatgaagaaatttggaggcccaaacaagattcgtcagaaatgtcgtctaagg
cagtgtgtcgtccgtgctcggaaaatgctacgtgttcgagatgaggagttttctctgcgt
gagaggaaggacaatataatgcacagagatagacgatacttagatgattacgacgagaac
gatatggagccatatgagcactacaaggacagaaatgcgtcatggggcagtgatgatgat
gaagacggcccagtttacagtcctgtcccacggaagaaagctataaaagtcaagcacgtt
aagaggagagacaagaaatttgacaaaaagaaagagtcccgtcgccacaagcagaaacag
aagcaccgtgatcgtttgcgacacagtgagaggggagacggcagacatggaggagacacg
caacagtgcctggggccgaactgtattgagccggcacgtccaaactcaaaatactgctct
gaggactgcggcatgaagctggctgccaaccggatctatgagatcctcccgcagcgaatc
cagcagtggcagcagagcccctgcgtcgctgaagaacagggcaaaaaacagctggagcgc
atccgcagggagcagcaggctgcacggatgcgcctcgcagagatggagcgtcgcttccac
gaactcgagggcatcattgccaaagccaagcagcaggtggtccaacaggatgaggatgtg
aatgaaacggacagtgaggacacagaccttcagatattctgtgtgtcctgcagtcacccc
gtcaaccccaaggtggcgctgaggcatatggagaggtgttatgccaagtatgaaagccag
acctctttcggttccattttcccaaccagaatagaaggggcaacaagactcttctgtgat
gtgtacaaccctcagagtaaaacatactgcaagagactccaagttttatgtccagaacat
tccagagacccaaaggtcccagcagatgaggtatgtggatgtccactagtgcgtaacgtg
tttgagccgactggagagtactgcagggtctcgaaacgcaagtgcaacaagcattactgc
tgggagaagctcagacgggcggaggtggacctggagcgtgtcagagtgtggtacaagctg
gatgagttgtttgaacaagaacgcaatgtgaggacggccatgaccaacagagcaggacta
ctggccctcatgctccaccagaccatccagcatgaccccctgaccactgacctccgcagc
aacaaagacagatag
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integrated database retrieval system
