Ctenopharyngodon idella (grass carp): 127522955
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Entry
127522955 CDS
T08802
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03320
PPAR signaling pathway
cide04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127522955
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
127522955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127522955
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cide03310
]
127522955
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127522955
Nuclear receptors [BR:
cide03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
127522955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127522955
NCBI-ProteinID:
XP_051769304
LinkDB
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Position
11
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AA seq
538 aa
AA seq
DB search
MLHRRFNIKKTSFTSDMVDTQTFAWPVGFGLSALELDELDDSSHSLDMKPFSTLDYATIS
GIEYEPSPPQNEIPHMMDLTHMYSYRTQENYRTQENYRMQENYRTQESIYRAHESSYTAE
DSGYRAHQTQNSIKLEPESPPQFAENSLSLSKAHEDPSASVLNIECRVCGDKASGFHYGV
HACEGCKGFFRRTIRLKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLMVGMSHNAIRFGRM
PQAEKEKLLAEFSTDMDHMHPESADLRALARHLYESYLKYFPLTKAKARAILSGKTSDNA
PFVIHDMKSLMEGEHMINCRQMPMQEHRRSDMGIMQEVELRFFHSCQSRSAEAVSEVTEF
AKSIPGFVNLDLNDQVTLLKYGVIEVLIIMMAPLMNKDGTLISYGQIFMTREFLKSLRKP
FCEMMEPKFEFSVKFNMLELDDSDMALFLAVIILSGDRPGLLNVKPIEDLQETVLHSLEL
QLKTNHPDSLQLFAKVLQKMTDLRQLVTDHVQLIQLMKETELDWCLHPLLQEIMRDLY
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacaggcggttcaatattaaaaagacatcattcacatcggatatggtggacacg
cagacgttcgcctggcccgtgggattcggcctgagcgctctggaactggacgaacttgac
gacagctcacactcgctggacatgaagcctttctccacgctggactacgccaccatttcc
ggcatcgagtatgagccgagtccgccgcagaacgagattccacacatgatggatctgacg
cacatgtacagctacaggacgcaggagaactacaggacgcaggagaactacaggatgcag
gagaactacaggacgcaggagagcatctacagagctcacgagagcagctacaccgccgag
gacagcggatacagagcgcaccagacacaaaactcgatcaaactcgaacccgagtctcct
ccacagtttgccgagaacagcctgtcactttccaaagctcacgaagatccgtccgcctcc
gtgctgaacatcgagtgtcgtgtgtgtggagacaaggcctcgggcttccattacggcgtt
catgcctgcgagggctgcaagggatttttccgcagaaccattcggttgaagctggtctac
gaccactgcgacctgcactgccgcatccacaagaagagtcgcaacaagtgccagtactgc
cgctttcagaagtgcctgatggttggcatgtcacacaacgccattcgttttggtcgaatg
ccccaagccgagaaagagaagctcttggccgagttctccactgacatggaccacatgcac
ccagaatcggctgatctccgagcgctggccaggcatctgtacgagtcctatctgaagtat
ttccccctgaccaaagccaaggccagagccatactgtcaggaaagaccagcgacaatgca
cctttcgttatccacgacatgaagtctctgatggaaggagagcacatgatcaactgccgg
cagatgcccatgcaggagcaccggagatccgacatgggcatcatgcaagaagtggagctt
cgtttcttccacagctgccagtcgcgttcggccgaagccgtcagcgaagtcactgaattt
gccaagagcatcccgggctttgtcaacctggacttgaacgaccaagtgacgctcctgaag
tacggcgtcatcgaggtgctcatcatcatgatggctccgctcatgaacaaagacggcacg
ctcatctcctacggtcagatcttcatgacccgcgagttcctcaagagcctgcgcaaaccc
ttctgtgaaatgatggagcccaagttcgagttctccgtcaagttcaacatgctggagttg
gacgacagcgacatggcgctgttcctggccgtcatcatcctgagcggagatcgtcccgga
ctgctgaacgtcaagcccattgaggatctacaggagacggttcttcactctctggagctg
cagctgaagaccaaccatccagactcgctccagctcttcgccaaggtcctgcagaagatg
acggacctgcggcagctggtgaccgaccacgtccagctgatccagctgatgaaggagacg
gagttggactggtgcttacacccgctcctgcaggagatcatgagggacttgtactag
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