Ctenopharyngodon idella (grass carp): 127522958
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Entry
127522958 CDS
T08802
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
KO
K16482
centriolar protein POC1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127522958
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cide03037
]
127522958
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
127522958
Cilium and associated proteins [BR:
cide03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127522958
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_Aladin
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_WDR41
CFAP251_N
WD40_RFWD3
DSE1_N
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_NOL10_N
eIF2A
Beta-prop_WDR19_1st
ASA1
Ge1_WD40
Beta-prop_HPS5
Beta-prop_SPT8
PAC11
Beta-prop_NWD2_C
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
RMC1_N
Beta-prop_Nup120_160
TRM82_WD
Tricorn_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_IP5PC_F
PEP5_VPS11_N
PROPPIN
PD40
Beta-prop_DCAF12
Beta-prop_ACSF4
Cytochrom_D1
Nucleoporin_N
DUF6244
Tricorn_N
RVT_1
EryCIII-like_C
Motif
Other DBs
NCBI-GeneID:
127522958
NCBI-ProteinID:
XP_051769312
LinkDB
All DBs
Position
11
Genome browser
AA seq
442 aa
AA seq
DB search
MSSVLDDPTLERHFKGHRDDVTSLDISANMKQIASGSMDACVMIWNMKPQMRAYRFVGHK
DAVTSVQFSPSGHLLASASRDKTVRLWVPSVKGESTAFRAHTGTVRSVSFSSDGQTLVTA
SDDKSIKVWAVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKNSRECIH
SFCEHGGYVNYADFHPSGTCIAAAGTDNTVKVWDIRTHKLLQHYQVHSAVVNGLSFHPSG
NYLITASSDSTLKILDLLEGRLLYTLHGHQGPATCVCFSRTGDYFASAGSDEQVMVWRTN
FDRVDYSAVLEQRCAASVHSGYSGPSAQVSEAAGVSDGRTLHKSDSTALVRQAVTSSGAG
VDSPSDSPPQQTAVDSVPAALTSTLQHIVAQLDVLTQEVSRTHQLVTGVPQGSVLGPLLF
SINTTSTHYTDTWFLLITCNSS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgtgttggacgatccgacccttgagaggcactttaagggtcacagagatgac
gtcacgagcctggacatcagcgctaacatgaagcagatcgcctcgggctccatggacgcg
tgtgtgatgatctggaacatgaagcctcagatgagggcctacaggtttgtgggacacaag
gatgcggtgacgagcgttcagttctcgccctccggtcatctgctggcctcggcgtcccga
gacaagacggtgcggctctgggtgcccagcgtgaaaggcgagtcgacggcgttcagagct
cacacgggaacggtgcgcagcgtcagcttctccagcgacggacagacgctcgtcaccgcg
tctgatgacaagagcatcaaagtctgggccgtccatcggcagaagttcctcttctccctc
aaccagcacatcaactgggtgcgctgcgccaagttttcgccggatgggcggctgatcgtt
tctgccagcgatgataaaacagtgaagctgtgggacaagaacagcagagagtgcattcat
tcgttctgtgagcacggcggatatgtgaactacgccgactttcacccgagcggcacctgc
atcgcagcggctggcacagacaacaccgtgaaggtgtgggacattcgcacgcacaaactc
ctgcagcactaccaagttcatagtgcggtggtgaacggcctctccttccatccgtctgga
aactacctcatcacggcctccagcgactccacgctcaagatcctggacctgctggagggc
cgactgctctacacgctacacggccatcagggtcctgccacctgcgtgtgcttctccagg
accggagactacttcgcgtcggctgggtctgatgaacaggtgatggtgtggaggacgaac
tttgaccgtgtggattacagcgcagtgctggagcagagatgtgctgcttctgttcacagc
ggctacagcgggccgtccgcacaggtgtcagaagccgctggtgtgtccgatggccgtacc
ttacacaagagtgacagcacagccctcgtcagacaggccgtgacctcatctggagctggg
gtggactccccgtctgactccccgccgcagcagacggcagtggacagtgttcccgcagcg
ctgaccagcaccctgcagcacatcgtcgcacagctggatgtgctcacacaggaggtatcc
agaacacatcaactggtcacaggtgttcctcagggctcagtgctgggacccctcctcttc
tccataaacactacatcgacccattatacagacacatggtttctcctcatcacctgcaac
tcatcctag
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