Ctenopharyngodon idella (grass carp): 127522961
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Entry
127522961 CDS
T08802
Name
(RefSeq) serine and arginine rich splicing factor 6b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127522961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127522961
Spliceosome [BR:
cide03041
]
Common components
Common spliceosomal components
SR proteins
127522961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127522961
NCBI-ProteinID:
XP_051769319
LinkDB
All DBs
Position
11:complement(16939199..16946041)
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AA seq
370 aa
AA seq
DB search
MPRVYVGRLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDTRDADDAVYELNGKDL
CGERVIVEHARGPRRDRDGYGGGYGGGGRSSSGYSSRSRSGRDKYGPPVRTEYRLIVENL
SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRAIDKLDGTDINGRKIR
LVEDKPRRRRSYSGSRSRSRSRRRSRSRSRRSSRSHSRSRSRSRSRSKRRSRSRSGRKSR
SRSGRKSHSKSPTKSRSRKSKSRSRSRTQKSRSRSDARKSRSKSRSKSRSKAKSERDSRS
RSKEKSVSKKSRSRSASPRENGDGERAKSTSRSPSPKENRRQSESPGKRSASRSPSRSKS
RSRSRSASQD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagtgtacgtcggcagactgagttatcatgtgcgggagaaggatattcagagg
tttttcagcgggtacgggaagcttttggagatcgatctgaagaacgggtatgggttcgtg
gagttcgaagacacccgcgacgcagatgatgcggtgtacgagctgaacggtaaagacctg
tgcggggagcgtgtgatcgtggagcacgcccgaggaccgcgacgggaccgagatggatac
ggtgggggttatgggggcggcgggcgcagcagtagtggttatagcagcaggagccgaagc
ggaagagacaaatatgggcctccggttcgcaccgagtaccgtctgatcgtggagaacctg
tccagtcgctgcagctggcaggacctcaaggacttcatgcgtcaggctggagaggtgacc
tacgccgacgcccacaaagaacggaccaatgagggtgtgattgagtttcgctcctactcg
gatatgaagagagctattgacaagttggatggcactgatattaatggaagaaaaatccgt
ctggtagaggacaagcccagacgccgccgttcctactctgggagcaggtccaggtctcgt
agcagacgccggtctcgcagcaggagccgcaggagttcccggagccattcccgctccaga
tctcgctccaggtcccgtagcaagcgccgctcccgttccaggtccggtcgcaagtcccgc
tccaggtctgggaggaagtctcactccaagtccccaacaaagtcccgctccagaaagtcc
aagtctcggtcccgctcgcgcacgcagaagtcccgctctcgctccgatgcgcgcaaatct
cgctccaagagtcgctccaagagccgctccaaagcaaagtcggagagagattcaagaagc
cgctccaaggagaagtctgtgagtaagaagtcccgaagccgctctgcttcgccgagggag
aacggagacggagagagggccaagtccacctctcgttcaccgtcccctaaagagaatcgc
cgtcagtcggagtcgcccggcaaacgctctgcgtctcgctctccgtctcgatcaaagtct
cgttcccgctccaggtctgcgtctcaagactag
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