Ctenopharyngodon idella (grass carp): 127522990
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Entry
127522990 CDS
T08802
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4b
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04080
Neuroactive ligand-receptor interaction
cide04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127522990
04082 Neuroactive ligand signaling
127522990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127522990
Ion channels [BR:
cide04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
127522990
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
127522990
NCBI-ProteinID:
XP_051769363
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Position
11:2151833..2160256
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AA seq
617 aa
AA seq
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MRAAWSVFLLLSVCLQLAFVFSTSPARAHAEERLLRSLFSNYNKLSRPVANISDVVLVHF
GLSIAQLIDVDEKNQMMTTNVWVKQEWNDYKLRWNPEEYENVTSIRIPSEIIWRPDIVLY
NNADGDFAVTHLTKAQVFYNGRIKWKPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDR
AKIDLISMASDVDQMDYWESGEWVIINAVGTYNIKKYECCTEIYPDITYSFIIRRLPLFY
TINLIIPCLLISCLTVLVFYLPSECAEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLI
GEYLLFTMIFVTLSIIITVFVLNVHHRSSRTHSMPHWVRQFFLHLVPRYLFMKRPPASGK
RNCGKLIEMMHKPMEAQSMFLRNNILDISPQSPLHHLDITSVQQDSSPKPMFFCSSPSSQ
YSILHEETSQTPVIGYTCAYTNSIFASSTSSFPDSILGTLLHTIPQDGAECTDCDIQGHN
AESVFMEAKESILGAGSCQHCLTSEGTSLQKLDHDEAGRCTRHNKPNAQIFSSVSDGTAD
LNAVEPVSNLSQSLLKALEGVQYIADHLRAEDSDFSVREDWKYVAMVIDRIFLWMFVLVC
ILGTVGLFLPPWLAGMI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagcatggagtgtcttcttgcttctgtctgtctgtttgcagctggcgtttgtg
ttttccaccagtccggctcgtgcccatgcggaagaaagactcctccggtctttgttcagc
aactacaacaagctctctcgtcctgtagcaaacatctcagatgtggttctggtccacttt
ggcctgtccattgctcagctcattgatgtggatgagaagaatcagatgatgaccacaaat
gtctgggtgaagcaggagtggaacgactacaagctgcgctggaacccagaggagtatgag
aatgtcacctccatcaggatcccctccgagatcatctggagaccggatattgtgctctat
aacaatgcggacggagactttgcagtgacacacttgactaaagcccaggtgttttacaac
gggaggataaaatggaaacctcctgccatttataaaagctcctgcagcatcgatgtcacc
ttttttcccttcgaccagcaaaactgcaaaatgaaatttggctcttggacgtacgatcgg
gccaagattgatctgatcagcatggccagtgatgtagaccagatggactactgggaaagc
ggggaatgggtcataataaacgctgttggtacttacaacatcaagaagtacgagtgctgt
acagaaatctacccagacatcacctactctttcatcatcagacgtcttcctctgttctac
accatcaatctaatcatcccctgcctgcttatatcctgcctgacggtgctggtcttctac
cttccctcggagtgtgcggagaaaatcacactgtgtatttccgtcctgctctctctgaca
gttttcctcctgctaatcacagaaattatcccctcaacctcactggtcatcccacttatt
ggcgagtacctcctcttcaccatgatcttcgtcactctatccatcatcatcacagtgttt
gtgctcaacgtacaccaccgttcgtcccgcacgcacagcatgccacactgggtccgccag
ttttttcttcacctggtgccccgttacctgttcatgaagcgtccacctgcctctggtaag
aggaactgtgggaaactgattgagatgatgcacaagccaatggaggcacagtccatgttt
ctacggaacaacattctggatatctctccgcaaagtccgctccaccatttggacattact
tcagttcagcaggactcttcccccaaacccatgtttttctgcagttctcccagcagccag
tattctatcctgcacgaagaaacttcacaaacgccggtcatcggttacacgtgtgcatac
acaaacagcatttttgcctccagcacatcttcatttccagattctatccttggtactctg
ctgcacactatcccgcaggatggagccgaatgtacagactgtgatatccaaggccacaat
gctgagagtgtcttcatggaagccaaagagagtattctgggagcagggagttgtcaacac
tgtcttacatctgaggggacgagtctgcagaagcttgatcacgatgaagcaggcaggtgt
actagacataacaagcccaacgcacagatcttcagttctgtcagtgatggcactgctgat
ctgaatgcagtggaaccggtgagcaatctgtcacagtctctgctcaaagccttggaagga
gttcagtacatcgctgaccatctcagagcagaagattcagacttttcagtgagggaagac
tggaaatatgttgccatggtgattgatagaatattcctctggatgtttgtgctggtgtgc
attctggggacggtcggactgttcctcccaccgtggctggctggaatgatctag
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