Ctenopharyngodon idella (grass carp): 127523174
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Entry
127523174 CDS
T08802
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cide03016
]
127523174
Enzymes [BR:
cide01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
127523174
Transfer RNA biogenesis [BR:
cide03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127523174
Prokaryotic type
127523174
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
127523174
NCBI-ProteinID:
XP_051769551
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All DBs
Position
12:20538380..20542117
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AA seq
304 aa
AA seq
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MTSSLCAAKSRTSMAGVSTVQNGSLSKLQSLHGIFAIYKKQGPTSADVLNTLKKALLKEA
GVANPNPRKRKKQPLKIGHGGTLDSNASGVLVVGIGEGTKMLTTMLAGSKKYRAVGELGK
ATDTLDVTGNVVEEKSYDHITKEAFEEKLKQFTGEIMQVPPLYSALKKDGKRMSVLLKQG
QEVEAKPARPVTVYSLSLQDFSPPLFTIDVECGGGFYVRSLVDDLAKGLSSCAHVKELIR
TKQGQFTLEEHALKEECWTLTDISQALQPCPEPSGQQKNAKKSKSKHKSGPSESKADDGD
HNSD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatcactttgcgccgcgaaatcaagaacaagcatggctggtgtctcaactgtg
cagaacggttcattatccaaactgcagtctctgcatggtatatttgccatctataagaaa
cagggtcccacctcagcggacgtgttaaacacactgaagaaggcgcttttaaaagaggca
ggtgtcgcaaatcccaaccctcggaaaaggaagaagcaacctttaaaaattggtcatggc
ggcaccctggacagcaatgcttctggtgtacttgtggttggaattggtgaaggaacaaag
atgctcaccacaatgcttgcaggatcaaagaaatacagagctgttggagagttaggcaaa
gcaactgacactcttgacgtcactggaaatgttgttgaagagaaaagttacgatcacatc
acaaaagaggcttttgaggagaagctaaagcagtttactggtgaaattatgcaggttcca
cctctatattcagcactgaagaaggatggcaagcgcatgtctgttcttctcaagcaaggt
caagaggttgaggctaaacctgcacgtccagttacagtgtacagtctatctttacaagac
ttcagccccccacttttcaccatagatgttgagtgtggaggtgggttttatgtcagaagt
ctggttgatgatctggccaaaggtctgtcgtcctgtgctcacgtcaaagaactgatccgg
acgaagcagggtcagttcacattggaagaacacgcattgaaggaagaatgttggacgttg
acagacatatcacaggctctgcagccctgcccagagccatcagggcaacaaaagaatgca
aagaaatcaaaatcaaagcataagtctggcccatctgaatctaaggctgatgatggagat
cacaacagtgactaa
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