Ctenopharyngodon idella (grass carp): 127523192
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Entry
127523192 CDS
T08802
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
127523192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127523192
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
127523192
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
127523192
NCBI-ProteinID:
XP_051769573
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Position
12:30937370..31016400
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AA seq
1300 aa
AA seq
DB search
MLPTEEGEDDDGDEKQLSTIMINFIENSKAGPSSVRKMDVIIPYTSDVPCDPVNGQRMWW
AFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCKGKKKDVQRVSNPVVLSDGVIKAGGQR
ETEAAASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSDPIESCQ
HFDKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WESFQNSQPLTYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQG
LSTMLANLFSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLK
LLLIAIEYKSDQRESRGGKCTLINPGNHVKMQEGTLGFFIASDAKEVKRALFYCKACHDD
ITDPKRIKKCGCKRNKKSTYKRMRLACCVACGGAERGCSCMSDSVASNMEVLHRGYPFSP
VSLYDNTTTLHSSKSNYNGYIKSIVEEEQQSALSPKKKQRNGGMRTSPTCSPKIRHDPLL
VPGHDQMETMDENIKKYDSTGMFHWCPSKDIEKVTLTRSEAAMTVLSGHVVVCIFGDVKS
ALIGLRNLVMPLRASNFHYHELKPIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADL
RAVNINLCDMCVILSANQNNIDDASLQDKECILASLNIKSMLFDDSIGLLQANSQGFTPP
GMDRSSPENSPVHGLVRQASITTGANIPIITELVKTDKLLPLVSLSQDKSSGNNIPMITE
LVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLV
TGGATPELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFC
KALKTYNMLCFGIYRLRDAHLGSPSQCTKRYVITNPPYDFELVPTDLIFCLMQFDHNAGQ
TRTNLSAQSTYFPSKKSPSGHSIPSSARPGRSRSRDLRDKQNAPRTNRGLSDKNWYTDEP
ENFPRNTQLKHTNTHAANQINQYKSTSNIIQPIREVEEEP
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgctccccactgaagaaggtgaagatgacgacggtgatgagaagcagctctccacaata
atgatcaatttcatcgagaattcaaaagcgggtccgtcctcggttcggaagatggatgtg
atcatcccctacacctctgacgtgccctgtgaccctgtgaacggccagaggatgtggtgg
gctttcctcgcctcctccatggtcactttctttgggggtctcttcatcatcctgctgtgg
aggactctcaagtacctgtggacggtgtgctgccactgcaagggtaaaaagaaggacgtg
cagcgggtcagtaacccggtggtcctcagtgacggcgtgattaaagcaggcgggcagcgg
gagacggaggcggcggccagcgaggtgggatggatgacctctgtgaaggactgggccggg
gtcatgatctctgctcagacgctcactggacgcgtgctggtggtgctcgtgttcgctctg
agcatcggcgctcttgtgatttacttcatcgactcctctgaccccatcgaatcctgtcag
cacttcgacaaggacttcacgctgcagatcgacatggccttcaacgtcttcttcttgttg
tactttggactgcgtttcattgcagccaatgataagctgtggttctggctggaggtgaat
tcagtggtggatttcttcaccgttccgcccgtgtttgtgtccgtgtatctgaaccggagc
tggctgggattgaggttcttgagagccttgaggctgatccagttttcagaaatattacag
tttttaaatatcttaaaaacaagcaactccataaagttggtgaatttgtgctcaatcttc
atcagcacatggctgacggcggcgggcttcatacatttggtggaaaactcaggggatcct
tgggaaagcttccaaaattcccaacctctgacgtactgggagtgtgtgtacctgctcatg
gtcaccatgtccacagtgggttatggagatgtttgtgctaaaacaaccctcggccgcctt
ttcatggtcttcttcattctcggaggattggccatgtttgccagctacgttcctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcagtaaatgggaga
aagcatatcgtcgtctgcggtcacatcacactggagagcgtctccaacttccttaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaatagtttttctccataatatttcc
cctaatcttgagctggaagccttattcaagagacacttcacacaggtggagttttaccaa
ggatccgttctcaaccctcatgatctcgctcgagtgaagattgagtcggccgatgcctgt
ctgatcttagccaacaaatactgtgcagatcctgatgcagaagatgcgtccaatattatg
agggtgatatccattaaaaactaccatccaaagatccgcattattacacagatgctgcag
taccacaataaggctcatcttctcaacatcccgagctggaactggaaggaaggtgatgac
gccatctgcctcgctgagctgaagttgggcttcatcgcccagagctgcctggcgcaaggt
ctctccaccatgctggccaacctcttctccatgagatcctacatcaagattgaagaagac
acatggcagaagtattatctagagggagtagccaatgagatgtacacggagtatctgtcc
agtgccttcgtgggtttatccttccccacggtttgtgaactctgctatgtgaagctgaaa
ctcctgctgatcgcgattgagtataaatcagaccagagagagagcaggggtggaaaatgc
actctgattaacccgggcaatcacgtgaagatgcaggagggaacgctgggcttcttcatc
gccagtgatgccaaagaggtgaagagggcacttttctactgtaaagcttgtcacgatgac
ataacagacccaaaacggatcaagaagtgtggatgcaaacgaaataagaagtccacctac
aagagaatgcgtctggcatgttgtgtagcttgcggtggggcagaacgtggctgctcgtgc
atgtcagacagtgtggctagtaacatggaggttctgcaccgtggctaccccttctctccc
gtgtctctgtatgataacacgaccactttacactcctctaaaagtaactataatggatac
atcaaatcaatagttgaggaggagcagcagtcggctctgtcgcccaagaaaaaacagcgt
aatggaggcatgaggacgtcacccacttgctcgccaaaaatcaggcatgacccgttgttg
gtcccaggacacgatcaaatggaaacaatggatgagaacataaagaaatatgattctaca
ggcatgtttcactggtgtccttcaaaagacatagagaaggtcacgctgactcggagcgag
gcggcgatgaccgttttgagcggtcacgtggtggtttgtatatttggggacgtgaagtcg
gccctgattggtctgcgtaacctggtgatgcctctgagagccagtaacttccattatcac
gagctgaagcccatcgtgttcgtgggatctctggagtacctgaagagagagtgggagacg
ctacacaacttccccaaagtctccatcttacctggcactccattgagccgggccgatctg
agagccgtcaacatcaacttgtgtgacatgtgcgtcatcctgtcagcaaatcagaacaat
atcgatgacgcctctctgcaggataaggaatgtattctggcgtctctcaacatcaagtcc
atgctgtttgatgacagtattggacttctgcaggccaactctcaaggtttcactcctcct
gggatggatcgctcctctccggagaacagtcccgtacacggactggtacggcaggcgtcc
ataaccacaggagcaaacattcccatcatcacagagctcgttaaaacagacaagttgctg
cccctggtttctctgagccaggacaagagcagcggaaacaacatcccaatgataactgag
ctggtgaacgactcaaacgtccagtttctggaccaggatgatgacgatgaccccgacacg
gagctgtatctcactcaacccttcgcctgcgggacagcgtttgccgtcagcgtgttggat
tcgttgatgagtgctacgtacttcaatgataatattctgactctgatccggacgctggtg
acgggcggtgccacgccggagctggagggtttgctggcggaggaaaacgctctgcgcgga
ggttacagcacccctcaaaccctggccaacagagatcgatgccgcgtcgcccagctggcg
ctctatgacggacccttcgctgatctcggggacggtggctgttacggtgatttattctgt
aaagcattaaagacgtacaacatgttgtgttttggaatctaccgattaagagacgcacac
ctgggatccccgagtcagtgcaccaaacgatacgtgatcacaaaccctccgtacgacttc
gagctggtgcctacagatctgatcttctgcctgatgcaattcgaccacaacgccggccag
acccgcaccaacctgtccgctcagtccacctacttccccagcaaaaagagcccgtccgga
cactccatcccctcgtccgcgcggccgggtcgtagccggagccgcgacctgcgggacaaa
cagaatgcgcccaggacgaatagagggctctcagacaaaaactggtacacagatgaaccc
gagaacttccccaggaacacacaactcaaacacaccaacacacacgcagccaatcagatc
aatcagtacaaatccaccagcaacatcatccagccaatcagagaagtggaggaggagcct
tga
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