Ctenopharyngodon idella (grass carp): 127523299
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Entry
127523299 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127523299
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
127523299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-met
zf-C2H2_15
DUF6801
Zf-C2H2_ZNF451_C
zf-C2H2_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
127523299
NCBI-ProteinID:
XP_051769810
LinkDB
All DBs
Position
12:complement(18163766..18228800)
Genome browser
AA seq
1095 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVSNYSHVLEGQSDSDDEDKLHIVEEEGSLLDGADCDSVAPD
DDPNGTADPDGRWDDVKEECMSDEDERSRDALVEEMLQQGDTAVIFPEAPDDEPRQGTPE
TSGHDENGTPDSFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFAYRT
QLDRHMTAHKAGREQRHVTQSGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECS
NCKKRFSHSGSYSSHISSKKCIGLISVNGRPRPSPATGAAKTPQCSSPSLPTSSPTARVQ
VRDKLDNSKPLQEQLPLTQIKSEPLDYEYKPVVVAPSARGVNGIFQGGAAAPLQGAVQAV
VLPTVGLVSPISINLGDLQNMLKVAVDGNVIRQVLESTQAKGQQAGTGIIGAGGVGIAQA
PQQVIQAISLPILDQDGSAKIIINYSLDPSQAQAVLQSPKKETLGLNTEVCKAQKLPEDL
TVKTNRDKTTITVDEKSMLLNDTTLKHCGKDGHRVNGKNLDGKLDLEEGLCPGKPPLKNL
LSLLKAYFALNNEPTKEELAKISESVSLPAEVVKKWFEKMQLGQISIDPSSPWLKMSRQP
XGDLDGTRGGSPRTEPDDQMNSEEQGERECCSPVEGVAAGVNGIESVPTSPSPLNLSADG
PVPARTLEEGEGPLDLSLPKSAATAAVASGHVNTVYSAQEEPLNLTCTKKELLSNASTNA
TIYASQPSANPINIVTTQLPTLVAITDQGQAQCLRALTTTKQTILIPQLTYSYTTTSSSP
AGADTQQKNIIHVNGIKEEKQEMGSEVTSTLEEQTDSDSGPTRKKMKRTESGLFACDLCD
KIFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFS
HSGSYSQHMNHRYSYCKKEAQGQGLGQGVEEEDNHSEEQPRTGSAAASPPSHLDSDERGS
STREDESEEEDEIGSGSLVDEDEIQVVKIGEEGDEDDQGADEEQEGERMEGAEQEDGDEE
GESEENDGQTLKVVVMQDECEEEENGEDERTAEEAMDTGALDHMKDTTERDEERENNKKN
SENEENTATMNGGVK
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggacaaacgtg
agtaactatagtcatgtgctggagggccagtcagactcggatgatgaagataagcttcac
attgtggaggaggaagggagtctcctggatggggctgactgtgacagcgtggcccctgat
gatgaccctaacgggaccgccgacccggacggcagatgggatgatgtgaaagaggagtgc
atgtcagacgaggatgagaggagcagagatgctttggttgaggagatgctccagcaagga
gacacagccgtcatcttccccgaggctccagacgacgaaccgcgtcagggcacaccagaa
accagtggacatgatgaaaatggcacgccagactcattttctcagcttctcacctgtccg
tattgctctcgtggctacaagcgttacacctcactgaaggagcacattaaatacagacac
gagaagagcgaggacaacttcagctgctctctctgcagctacacctttgcctaccgaaca
cagttggacagacacatgaccgcacacaaagctggccgagaacagcggcatgttactcag
tcaggtggaggagggaatcgaaagtttaaatgcactgaatgtggcaaagccttcaagtac
aaacaccacctgaaagaacacctgcgcatccacagtggagaaaagccttatgaatgctcc
aactgcaagaagcgtttctctcattccggctcctacagttcccacatcagcagtaagaag
tgcatcggcctcatctcagtaaacgggcggccacgaccttctcccgccaccggggctgcc
aagaccccgcagtgctcttccccatccctgccaacctcttcccctacagcacgtgtccaa
gtcagagacaaactggacaacagcaaaccccttcaggagcagcttcccttgacgcagatc
aagtccgagccgctggactatgagtacaagcccgtggtggtggccccatctgctagaggc
gtaaatggcatcttccagggtggggcggcagcccctctccagggtgccgtacaggctgtt
gtgctcccaacagtgggtctggtatccccaatcagcatcaacctgggggacttacagaat
atgctgaaggtggcagtggatggcaacgtcatcaggcaagtgctggaaagcacgcaagct
aaggggcagcaagcagggacgggaatcattggagcaggaggggtgggaattgctcaagca
ccccagcaagtcatccaggccattagtcttcccatcttggatcaggatggcagtgctaag
atcatcatcaactacagtctagacccgtcacaggcccaagcggtccttcaaagtccgaag
aaggaaactttggggttgaacacggaggtctgcaaggctcagaagctgccagaggacctg
actgtcaagacaaatagggacaaaaccaccatcactgtggatgaaaagagtatgttactc
aatgacacaacacttaagcactgtggtaaagatggacatagggtaaatgggaaaaatctt
gacgggaagttggacttggaggaaggactgtgtcctggtaagcctcctctgaagaacctt
ctctccttgcttaaggcttactttgccttaaacaacgagcccactaaggaggagctggca
aagatatcagagtctgtcagtcttccagcagaggttgtaaagaagtggtttgagaagatg
cagctgggacagatctccatagacccttcctcaccctggctgaagatgagcagacaaccc
nctggggatttggatgggactagaggtggatcacccagaacagagccggatgatcaaatg
aactcagaggagcaaggggagagggaatgctgtagcccagtagagggcgtagcagctggg
gtgaatgggatcgagagtgtccctacatccccttcaccactaaacctatcggccgatggt
cctgtcccagccaggactcttgaggaaggcgaaggacctctcgatctgtcgctaccaaaa
tccgctgccacagctgctgtggctagcggtcacgttaacactgtttactcggctcaagag
gagccgctgaatttgacttgcacaaagaaggaactgctcagcaatgcaagcaccaatgct
accatttatgccagccaaccaagtgccaatcccataaacattgtgaccactcaactgccc
accctagtggctatcactgaccagggacaagcacaatgtctacgtgcacttaccaccact
aaacagaccatcctgatcccgcagctgacgtacagttacaccactacatcctccagccca
gcaggggccgacacacaacagaagaacattatacacgtcaatggcatcaaggaggagaaa
caggagatggggtcagaggtcacctcaacattggaagagcagacagactcagactcaggg
ccgacgaggaagaagatgaaaaggacagagagtgggctgttcgcctgtgacctgtgtgac
aaaatcttccagaagagcagctcactgctccgccataaatacgaacacacaggaaagagg
cctcatgaatgcgggatctgcagcaaggccttcaaacacaagcaccacctaatagagcac
ctgcgcctgcactccggagaaaagccgtaccagtgcgacaagtgcggcaaacgcttctct
cactccggctcctactcgcaacacatgaaccaccgatactcctactgtaagaaagaggct
caaggtcaaggactaggccaaggagtcgaggaagaggacaaccacagtgaggagcagcct
cggacaggaagtgcggcggcctcgcccccctcccacctggactcggatgaacgggggagt
agtaccagagaggatgagagtgaggaggaggatgagataggctctgggagcttagtggat
gaggatgagattcaggtggtcaagattggagaggagggagatgaagacgaccagggagca
gatgaagaacaggaaggagagaggatggagggggcggaacaagaagatggcgacgaggaa
ggtgagagcgaggaaaatgacggacagacgctgaaagttgtagtgatgcaggatgaatgt
gaggaggaagaaaatggggaagatgagcgaacggcagaggaagccatggacacaggagcc
cttgatcacatgaaggacacaacagaaagagacgaggaaagagagaacaataaaaaaaac
agtgaaaatgaagaaaacacagccactatgaatggaggtgtgaaatga
DBGET
integrated database retrieval system
