Ctenopharyngodon idella (grass carp): 127523511
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Entry
127523511 CDS
T08802
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127523511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127523511
03036 Chromosome and associated proteins [BR:
cide03036
]
127523511
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127523511
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127523511
PBAF complex
127523511
GBAF(ncBAF) complex
127523511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
127523511
NCBI-ProteinID:
XP_051770238
LinkDB
All DBs
Position
2:9844082..9868729
Genome browser
AA seq
505 aa
AA seq
DB search
MDMEDSAGGARKATKSKLFEFLVHGVRPGMTSGARMPHQGAPMGPPGPPYGGTPPIRPGM
PNPALDPNRKRPAPTQPVQPPPVQNRPRKKPLGFPATNEISARQMDMREAQSDPAIGSNA
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLR
LYISNTFNPAKPDAEDSEGSIASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKDLYG
PDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ
TRSCIIQALWQYVKTNKMQDSHEKEYINCDKYFQQIFDCPRLKFCEIPQRLTNLLLPPDP
IVINHVISVDPNDQKKTACYDIDVEVDDPLKSQMNGFLLSTANQQEIASLDNKIHETIES
INQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDTVGNPEEERRAEFYNQPWSQEA
VSRYFYCKIQQRRQELEQALAMRTT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaggattctgccggaggagctcgtaaagccaccaagagtaaactgtttgag
tttctcgtccatggagtgcgtccagggatgacttcaggggcacggatgccccatcaagga
gctcccatggggcctcctggacctccatatggaggaacaccgccaattcgaccagggatg
cctaacccagccctagaccccaaccgaaaacgtccagccccaacccagcccgtgcaacct
ccccctgttcagaaccgtcccagaaagaaaccacttggatttccagcaacaaatgagata
tctgcgagacagatggacatgagagaagcccagtcagatcctgcaattggatccaatgcc
aagagaagaaaaatggcagacaagattctccctcagaggatccgtgaactggtgccagag
tcccaggcgtacatggacctcctggcttttgagcgcaaacttgaccaaaccattatgagg
aagagggtggatatacaggaagccctcaaaagaccaatgaagcaaaagcggaagctacgc
ttgtacatttcaaacactttcaaccctgccaaacctgacgcagaggactcggagggcagc
attgcatcatgggagctgcgtgtagagggcaagttattggatgatcctggaaaacaaaag
aggaagttttcgtctttctttaaaagccttgttattgagctggacaaggatctgtacggc
cctgataaccacttagtggagtggcaccgcacccctacaacccaagagacagacggcttc
caggtgaagaggcccggcgatgtgaatgtgcgctgtaccctcttgctcatgctggattac
cagcctcctcagtttaagctggatcctcgcctcgcacgtctccttggcatccacactcaa
acccgctcctgcatcatccaggcattatggcagtacgtcaagaccaacaagatgcaggat
tctcatgaaaaggagtacatcaactgtgataaatatttccagcagatcttcgactgtcct
cgtctaaagttctgtgagatccctcagcgactaaccaacctgctgctgccgcctgatcct
attgtgatcaatcatgttatcagtgtggatccaaatgaccagaagaagacagcctgctat
gacattgatgttgaagttgatgatcctcttaagagtcagatgaatggattcctgctgtcc
acagccaatcaacaagagattgcatccctagacaacaagatccatgaaactatcgagtcc
atcaaccaacttaagattcaaagagatttcatgctcagcttttccagagaccccaagggc
tacatccaggactggatctgctcccagaaccgggatcttaagctgatgacagatacagtt
ggaaatccagaagaagagaggagagcagagttttataaccagccctggtctcaggaagct
gtcagtcgctatttctattgcaagattcaacaacgaagacaggagcttgaacaggcttta
gcaatgcgaaccacttaa
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