Ctenopharyngodon idella (grass carp): 127523513
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Entry
127523513 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127523513
Cell adhesion molecules [BR:
cide04515
]
Cadherins
Major cadherins
127523513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Stevor
Cadherin_4
RET_CLD1
ASFV_J13L
CLSTN_C
DUF443
Motif
Other DBs
NCBI-GeneID:
127523513
NCBI-ProteinID:
XP_051770242
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All DBs
Position
12:25641530..25794758
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AA seq
803 aa
AA seq
DB search
MLRRNCLLLFLCFLFEQSSCAPFQSRPGQEWPHSQTGPSAAGRNGGSRGFQRVKRGWVWN
QFFVLEEYMGSDPQYVGKLHTDLDKGDSAVKYTLSGEGAGTIFTIDQTTGDIHALRSLDR
EEKPYYTLRAQAVDIDTNRPLEPESEFVIKVQDINDNEPKFLEGPYMATVPEMSPVGTYV
MKVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIRTALPNMDREVKELYQVLIQA
KDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSIFHLRVPESSAVGSAVGRIKAHDLDIG
KNAEVEYNIVPGDGGAMFDITTNEHNQEGIIMLKKPLDYETKKAYTFKVEASNAHLDPRF
HSFGPFKDTATVKINVLDVDEPPVFSKPTYTMDVYEDTPQGTIIGAVTAQDLDAGNSPVR
YSIDWKSDLDSFFDIDPVRGTISTNEFLDRESIAQHNISVVATKVNNPVLTSRVAVTVHV
LDINEFPPELAMPHETFVCESAKVGQVVQVISATDQDLPQAGQRFSFKSPQEGVKTKNFT
IRDFGNNTAGVVALRGGFKRRSQEIYHLPVVIEDGGLQTLSSTSTLTIRVCGCDIDGSLL
TCSAEAIFLPVGLSTGALIAILVCIVILLVIVVLYVGVRRQKKKETLMTSKEDIRDNVIH
YDDEGGGEEDTHAFDMGTLRNPKVIKENLFRRDVKPELGLCPRRPIASQNSADISNFISQ
RLQEHDGDTSAPPYDSLATYAYEGEGSVAESLSSIESVKGETEEDYDYLNEWGPRFKTLA
GIFGERSESQSDVTSSTTTENKH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggaggaactgcctgctgctgttcctgtgcttcctctttgagcagagctcctgc
gctcccttccaaagcaggccagggcaagagtggccccacagccagacggggccatcggca
gcaggaaggaatggaggttccagaggattccagagagtcaagaggggctgggtgtggaac
cagttctttgtgcttgaggagtacatgggctcggacccacaatacgttggaaagttacac
actgacttggataaaggggatagcgcagtgaaatacactctctcaggcgagggggctgga
accatcttcaccatcgaccagaccaccggggacatacacgctctgcgcagtctggatcgg
gaggagaagccttactacacgctacgagcgcaagctgtggacatcgacaccaaccgtcca
ctggaaccagagtcagagtttgtcatcaaggtgcaggacatcaacgacaatgagccaaag
ttcctggaaggcccatacatggctactgtacctgagatgtcacctgtgggtacgtacgtg
atgaaggtgacggcaacagatgcagacgaccctacatacggcaacagtgccagggtggtg
tacagcatactgcatggccagccgtacttctccgtcgaccccaaaacaggggtgatcagg
acagctctacccaacatggaccgggaggtgaaggagctgtatcaggttctcatccaggcc
aaagacatgggcgggcagttagggggtctggcagggaccaccaccatcaacatcaccctg
agtgacgtcaacgacaacccacctaggttctccaaaagcatcttccatctgcgtgtaccg
gagtcatcagcagtcgggtcagctgttggccgaatcaaagctcatgatctggacatagga
aaaaatgcagaggtggaatacaacatcgtccctggagatggaggagccatgtttgacatc
accaccaacgagcacaatcaggagggaatcatcatgctcaaaaagccactggactatgag
accaaaaaagcgtacacatttaaagtggaggcctcgaatgcacacctggatccacggttc
cacagttttggcccgtttaaagacaccgcaacagtaaagataaacgttctggatgtggat
gagcctcctgtcttcagcaaacccacctacacgatggatgtttatgaggacacgccgcaa
ggcaccattataggagccgtgactgcacaggatctcgacgcaggaaacagtccagtcagg
tattccattgactggaagagcgacctggacagcttcttcgacatcgatcccgttagagga
accatctccaccaatgagtttctggacagggagagtatagcgcagcacaacatttcagtt
gtggccactaaagttaataacccagtgctgaccagtagagtggctgtcacagttcacgtg
ctggacattaatgagtttccaccagagctggccatgcctcacgagaccttcgtgtgtgag
agcgccaaagtcgggcaggtggttcaggtcatcagtgcaactgaccaggatctccctcaa
gccggacaacgattttccttcaaatcccctcaagagggagtgaagaccaaaaacttcacc
atcagagactttgggaataacactgccggagtcgtggccctgcgtggtggttttaaacgg
cgatctcaagagatctaccaccttccggtggtgattgaggatggtggcctccagactttg
agcagtaccagcaccctcaccatccgcgtgtgcggctgtgacatcgatggatctttatta
acatgcagcgctgaagccattttcctccctgtgggcctcagtaccggagccctgatcgct
attctggtgtgcatcgtcatactgctggtgatcgtggtactctacgtgggggttcggcgg
cagaagaaaaaagagactctcatgacgtccaaagaggacatccgtgacaacgtcatccat
tacgacgatgaaggaggcggtgaggaggacacgcacgccttcgacatgggcaccctccgc
aaccccaaagtcatcaaggaaaacctgtttcgccgagatgttaagccagagttgggtttg
tgtccacggcggccaatagcctcgcagaacagcgctgacatcagcaacttcatcagtcag
aggctgcaagagcacgacggtgacacttccgctccgccatacgactcgctggccacatac
gcctacgagggcgagggctcggtggcggagagtttaagctctatagagtctgtgaagggg
gaaacggaggaggactatgattacctcaacgagtgggggcctcgcttcaaaaccctcgca
gggatattcggagaacgatcagagagccaatcagacgtaacatccagcaccaccactgaa
aacaaacactga
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