Ctenopharyngodon idella (grass carp): 127523565
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Entry
127523565 CDS
T08802
Name
(RefSeq) neurexin 1a isoform X1
KO
K07377
neurexin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127523565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127523565
Membrane trafficking [BR:
cide04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
127523565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
127523565
NCBI-ProteinID:
XP_051770338
LinkDB
All DBs
Position
12:16836610..17030026
Genome browser
AA seq
1499 aa
AA seq
DB search
MSFSMRNGAHLIWMGLLVCCLVDMGASMEFTGAEGQWARFPMWNACCESEMSFNMKTKSA
HGLLVYFDDEGFCDFLELLIHNGRLSLRFSIFCAEPATVLSDTAVNDSRWHAVTLRRNFK
NTTLVVDEEIKWVEVKSKRRDMTVFSHLFLGGIPPELRSVALRLTSSAIKDQVPYKGWIT
NLRVNGSEPPLINSEGINSDICEADHVCLNGGVCSIVNDEPICDCSETGFQGKDCSEEEA
YVGGLAHLMMGDQGKRKEREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQRNGL
MLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHS
GIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKE
VVYKNNDVRLELSRLAKLGDPKMKVSGVVAFKCENVATLDPVTFETPESFITLDKWTAKK
AGSISFDFRTTEPNGLLLFSHGKPKPQQQKDPKSPKTLKVDFFAIEMLDGHLYLLLDMGS
GTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISVNSIRTPYNAPGESEILDLDDILYLGGL
PEDRAGLIFPTEVWTALLNYGYVGCVRDLFMDGQSKDIRRIAEAQRAVGVKPSCSKEPPK
QCLSNPCLNSGTCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKIQLPVVMHTE
AEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTTSKGPETI
FAGQNLNDNEWHTVRVVRRGKSLKLTVDDLQPSEGQITGDHTQLEFHNVETGIVTEKRYM
PAVPSNFIGHLQGLSFNGMSYIDLCKNGDIDYCELNAMIGYRSIVADPVTFKSRSSYVTL
PTLQAYYSMHLFFQFKTTSPDGLILYNRGDGNDFIVVELVKGYLHYVSDLGNGAHLIKGN
SNTPLNDNHWHNVMISRDTNNLHTVKIDTKITTQTTMGAKNLDLKGDLYVGGVAKEMYKD
LPKLVHSKEGFQGCLASVDLNGRLPDLLSDALSNAGQVERGCEGEENGPSTTCQEDSCSN
QGVCLQQWEGFSCDCSMTSFGGPLCNDHESLTSLEQLEAGTTYIFGRDGGLIVYTWPPND
RPSTRADRLAVGFSTQQKDAVLVRVDSSSGLGDYLQLQIEKGNIRVVFNVGTDDINIEET
SKFVNDGKYHIVRFTRSGGNATLQVDDLPVIERYPTGNIDNERLAIARQRIPYRLGRVVD
EWLLDKGRQLTIFNSQTTIKIGGWEKGSRPFQGQLSGLYYNGLKVLNMAAEGDPNVRVEG
SARLVGDMPSSSITPQSSASATGNRSETSPSITDITTTTASNRQGKQTTTPQDDLLVASA
ECPSDDEDIDPCDPSSGGLAHPPLPEAKGYPSPEVIRESSSTTGMVVGIVAAAALCILIL
LYAMYKYRNRDEGSYHVDESRNYISNSATQPNGAAVKEKPIGVPKNKKDKKNKDKEYYV
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctcaatgcggaacggcgcacatctaatctggatgggcttactggtttgttgc
cttgtcgacatgggggccagcatggagttcaccggcgcagaaggccagtgggccaggttt
cctatgtggaacgcctgctgcgagagcgaaatgagtttcaacatgaagaccaaaagcgct
catggacttttagtgtactttgacgacgagggattctgtgacttcttggaactgctcatc
cacaacggtagactcagtttgcggttctccatcttctgcgccgagccggcgacggtgctc
tccgacaccgccgtcaacgacagccgctggcacgccgtgaccttgcgcaggaatttcaaa
aacactacgttagttgtggacgaagagatcaagtgggtggaggttaagtcgaaaaggagg
gacatgacggtcttcagccatttattcttaggaggaatacctcctgaactgcgatctgta
gcattacgcctcacgtcttcagccatcaaagatcaggttccctacaaaggatggataacc
aatctgagggtgaacggttccgagccgccgcttatcaatagcgagggaatcaacagcgac
atttgcgaagccgaccacgtttgcctgaacggtggagtctgcagcatcgtcaacgacgag
ccgatttgcgactgctccgaaacgggattccagggaaaagactgcagtgaagaagaggcc
tatgtaggaggtcttgcgcacctgatgatgggcgaccaagggaaaagaaaagagagagaa
gagtatgtggccaccttcaagggttcagagtatttctgttacgacctgtccccgaacccc
atccagagcagtagcgatgaaattacgctctccttcaagaccctgcagcgcaatggactg
atgctccacaccggaaaatcggcagactacgtcaacctggcgctgaagaatggtgctgtc
tcgctggtcatcaacctgggctctggggccttcgaggccctggtggagcccgtcaatggg
aaatttaatgacaatgcctggcatgatgtgaaggttaccaggaaccttcgtcagcactca
ggcattggacacgctatggttacaatatccgtggatggaattctgaccaccactggatat
acacaagaggactacaccatgctaggctcggacgactttttctatgtcgggggtagtccc
agcactgcggatctgcccggatcccctgttagcaacaactttatgggctgcctgaaagag
gttgtgtacaagaacaatgatgtaaggctcgagctatctcgactggccaagctaggcgac
cccaaaatgaaggtgagcggtgtggtggccttcaaatgtgaaaacgtcgctaccctagat
cctgtcaccttcgagacaccagagtcattcattacccttgacaagtggactgccaaaaaa
gccggttccatctccttcgacttccgcaccactgagcccaacggcctgctcctcttcagc
catggaaaacccaaaccgcagcagcagaaagaccccaagagtcccaaaacattgaaggtg
gatttcttcgccatagagatgctggacggccacctataccttctactggacatgggctcg
ggcaccaccaaaacccgtgccgtcaacaaaaaagtcaacgacggagaatggtaccacgtg
gacttccagagagacggaagatcaggcaccatttccgtcaactcgatccgtactccctac
aacgctcccggtgagagtgagatcctggacttggacgacatactctacctgggcggcctg
ccagaggaccgcgccggtctgatcttccccacggaggtgtggaccgctctccttaactac
ggctatgtgggctgtgtgcgagatctgttcatggacggccagagcaaggacatccggcgg
atagcggaggctcagagagcggtcggggtgaagccatcctgttctaaggaacctcccaaa
cagtgtctaagcaacccctgccttaatagcggcacctgcagagagggctggaaccgatat
gtgtgtgactgctcagggacgggctatctaggtcgctcctgtgagagagatgccaccatc
ctcagttatgatggcagtaagttcatgaagatccagttgccagtagtgatgcacacagag
gcagaagatgtgtcgctgcgcttccgttcccagcgtgcctatggtgttctcatggcaacc
acctcccggaactcagctgacactctgaggctggagctggacggagggcgtgtccgactc
actgtcaatctagactgtatcaggataaactgtactaccagtaaaggtccagagaccata
tttgcgggccagaacttgaatgacaacgaatggcacacagttcgtgttgtcagaagaggc
aaaagtctgaagctaacggtggatgacctccagccatctgaaggtcaaatcacgggggac
cacacgcagctggagttccacaatgtggaaacaggcatcgttacagagaagcggtacatg
cccgccgtgccctccaacttcattggacacctgcagggtctgtccttcaatggcatgtcc
tacattgacctgtgcaagaatggcgacattgactactgtgaactgaacgccatgatcggc
tacaggagcatcgtggcagatccggtgaccttcaagtctcgctctagctatgtgaccctg
cccaccctgcaggcctattactccatgcacttgttcttccagtttaaaaccacttcacca
gatgggctcatcctgtacaaccgaggagatggcaatgactttatagtagtagagctggta
aaaggatatctccattatgtgtcagatctgggaaatggagctcatctcatcaaaggaaat
tccaacacacctctgaatgacaatcactggcacaatgtgatgatctcaagagatacaaac
aaccttcacactgtcaaaatagataccaaaatcaccacacagactaccatgggagctaag
aacctggatctgaaaggtgatttgtatgtgggaggtgtggccaaagagatgtataaggac
ttgccaaagctggtgcattctaaagagggcttccagggctgcttggcatctgtggacctg
aacggccgtttgccagacctgctgtcagacgcactgtccaacgccggccaggtggagaga
ggatgcgaaggtgaggaaaacggccccagcactacctgtcaagaggattcttgctccaat
cagggcgtgtgtctgcagcagtgggaggggttcagttgcgactgcagcatgacatcattt
ggagggccgctctgcaatgaccatgaaagtcttacaagtttggaacagcttgaggcggga
accacatacatattcggacgtgacggagggctcattgtgtacacatggccgcccaacgac
agaccgagcacacgagctgaccgactggctgtcggctttagcacccagcagaaggatgca
gtgctggttagggtggacagctcttccggcctgggagactacctgcagcttcagattgaa
aaaggcaatatcagagtggtgttcaatgtgggcaccgatgacataaacattgaagaaacc
tcaaagtttgtaaatgatggaaagtaccacatagttcgctttacgagaagtggtggtaac
gccaccttgcaggtggatgatctgccagtcattgagcgctacccaacaggcaacattgat
aacgaacgcctggcgattgctagacagcgaatcccatatcggcttggtcgagtagttgac
gaatggctactcgacaaaggtcggcagctcaccatcttcaacagtcagaccaccataaag
attggaggctgggagaagggcagtcggcccttccagggccagctctcagggctttactac
aatggcctaaaagtgctcaacatggccgccgagggcgaccccaacgtgcgtgtggagggt
agtgcccggctggtgggagatatgccctcctcttctattacgccccagtccagcgcatcc
gcaacgggcaaccgctcagaaacgtcaccctccatcaccgacatcaccactacaactgca
tccaatcgccagggcaaacagacgacaactccacaggatgatcttctggtagcgtcggca
gaatgtcccagtgacgatgaggacatcgacccttgcgacccaagttcaggtgggttagct
caccccccactgcccgaggccaagggttaccccagcccggaggtgattcgggagtccagc
agcaccacaggcatggtcgtaggcattgtagcggccgccgccctctgcatcctaatcctg
ctctatgccatgtacaaataccgaaaccgcgacgagggctcgtaccacgtggacgagagc
cgtaactatattagtaattctgccacgcagcccaacggagccgctgtcaaagaaaagccc
attggcgtgcccaaaaataaaaaagataaaaagaacaaggacaaggagtactacgtctga
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