KEGG   Ctenopharyngodon idella (grass carp): 127523593
Entry
127523593         CDS       T08802                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cide03036]
    127523593
   03400 DNA repair and recombination proteins [BR:cide03400]
    127523593
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    127523593
DNA repair and recombination proteins [BR:cide03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     127523593
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N HEAT_2 Sec7-like_HUS Adaptin_N HEAT_EF3_N
Other DBs
NCBI-GeneID: 127523593
NCBI-ProteinID: XP_051770455
LinkDB
Position
12:complement(1320033..1347599)
AA seq 1015 aa
MAADNSVLLGLVEEFVSGQVDSKATDTATGVKTGQFTILQLVEALGLSLTSSQPQTRSRG
VQLLSLVLQECYSCLSEREVEVLLAFYENRLKDHYVITPHVLQGLKALTKCSVLPPGSAV
SILRSIFQDVHVQSLMLAERSCVYNILISLMESREEELKGLGADFTFGFVQSVDGERDPR
NLLLAFQVARNIIHRGYDLGKFVEELFEVTSCYFPIDFSPPPNDPHGITQEDLILSLRAV
LTGTSRFAEFLLPLIIEKLDSDVQSAKVDSLLTLAACGLTYTHKELAEFLPGLWSSIRRE
VFQTASERVESAGLSALSALTSCLSRSVLSSDSEDYLQVFLHLVLKDCQHHLCEPDLKLV
WPSAKLLQAAAGASYRASLIVSAVVIPALLEQYNNRTQCAQRRTLLEVLQGFVQPTPLSR
PADGEESVLVAFQQSLCSVVFSALVESSAGLQVTATRVLTALGQQPGLLAQTDIEKAVDH
LTRLILEEGDTQVSLAVVECSGSLAHLHPKAFISRMIPRLREEILSECNAAVRQRCVTAV
ASVSSQLGVVQESTPVLLQVLASAHTGSCSFSMEEVTAACISLQRIAAHAHDAEEIGQFF
HDNIIPRLLGLALQAALQSRDSGRSSPLTDEAVLSALVPVISTACAALQSGSASRMAAQA
VSLFLHGDVSFLPENAFPSQIHLLQSQAESWGPSQLVCLLMACVCSLPRSVDIPEIDMLL
VQLEDLSCTCSHLFSYTFAAKCFAGLVNKRPAGEALDAVLERVLKRISVELDNVSSSQRT
QAFTLLLWVAKALLLRYHPLSTALTDKLFALLSDPELGSQAADGFCVLMSDSPDVLNRSC
HADVRIMYRQRFFAENSTKLVKGFDSAEQEKKSCYLKALSHIVNNLPREVQLTELPALLP
LLLEALSCPDQAVQLSTLSCLQPVLLEPPAALRNQLEALFSRLLALATSPAMKVRIASLR
CVHALSRLPEHMVLPFRARVLKALAAPLDDTKRLVRKEAVAARGEWFLLGSPGGR
NT seq 3048 nt   +upstreamnt  +downstreamnt
atggccgcggataacagtgtgctgctgggtttagtggaagaattcgtgtcaggacaggtt
gatagcaaggccacagacaccgctacaggtgtcaagactggacaattcacgattctccag
ctggttgaagctttggggttgagtctgaccagctctcagcctcagacgcgtagcagagga
gttcagctcctgtctctagtcctgcaggaatgctacagctgcctctctgagagggaggtg
gaggtcctgttagctttctatgaaaacagactgaaggatcactatgtgatcactccacat
gttcttcagggactcaaggctttgacaaaatgctcggttctgcctcctggttcagctgtg
tccattttgagatccatctttcaggatgttcatgttcagtccttgatgttggctgagcga
tcatgtgtttacaacatccttatcagtctaatggagtccagagaggaagagctcaaaggt
ttgggtgcagactttacatttggatttgtgcagtcagtagatggagaacgggatccacgc
aacctcctgctagcgttccaggtggccaggaacatcattcacaggggttacgatctcggt
aaatttgtagaggaactctttgaagtgacgtcctgttatttccccatagacttcagccct
ccacccaatgatcctcatgggatcacacaggaagatcttattctttctctacgggctgtt
cttactgggacgtctcggtttgcggagtttctgttaccattgatcattgagaagctggac
tcagatgttcagagtgccaaagtggactccctgctgacactggccgcctgcggtctgaca
tatactcataaagagctggcagaattccttccaggcctttggagctcgatacggagagag
gtgttccagacggccagtgagagggtggaatcggccggtctgtcggctctcagtgcgctc
acgtcctgtctgtctcgctctgtgctcagctcagactcagaggattacctgcaggtgttt
ctgcacctcgtcctcaaagactgtcagcaccatctctgcgagccagacctcaagctggtg
tggcccagtgccaaactcctgcaggccgccgccggagcctcatacagagcgagtctgata
gtgtcggctgtcgtcatacctgccctcctggagcagtataataacaggacgcagtgtgct
cagcggcgcaccctgctggaggttctgcagggtttcgtgcagcccaccccactcagccgg
cctgcagatggagaggagagtgtattggttgcgtttcagcagtctttgtgtagcgtggtg
ttttctgcgctggtggagtctagtgctggtctacaggtcacagccacacgtgtgcttact
gcgctgggacagcagcccggcttgttggctcagacagatattgagaaagctgttgatcat
ttgaccagactcattctggaggaaggagatactcaagtgagtttggctgtcgtggagtgt
tcaggctctctggctcatctgcatcccaaagccttcatctccaggatgattcctcggctg
agggaagagatcctgtcagagtgtaacgcagctgtccgtcagcggtgtgtgacggcggtg
gcgtctgtgtcatctcagctcggtgttgtgcaggaaagcactcccgttctgttacaggtg
ctggcttcagcccacacaggtagctgtagtttctccatggaggaagtgaccgctgcatgc
atcagtttgcagaggatagcagcgcacgcgcatgacgctgaggagattggacaattcttc
catgacaacatcattccacgacttctaggactggccttacaggcggcactgcagagtaga
gactctggtcgcagtagtccactcacggatgaagccgttctgtctgctttagttccggtc
atcagcacagcctgtgctgcgttacaatcagggtcagcgtcccgcatggccgcccaggct
gtttctctgttcctgcatggagatgtgtcctttctgccggagaatgccttcccttcccaa
atccacttgctccagagccaggcagagtcttggggtccgtctcagttggtgtgtctgctg
atggcctgtgtttgctctcttccacgcagcgtggatattcctgagattgacatgcttctg
gtccagttggaagatctgagctgtacgtgttcacacctcttctcctacacgtttgctgca
aaatgcttcgctggtttggtcaacaagaggccggcaggtgaagctcttgacgcagtgctg
gagagagtgttgaagaggatcagtgtggagctggacaacgtttcctcttcccagcgaaca
caagcgttcacactgctgctctgggtggccaaagccctcctcttacggtaccatccacta
tcaacagctctgactgacaagctctttgctctgttgagtgacccggaattaggatctcag
gcggccgacggcttctgcgtcctcatgagcgactcgccggatgtgctcaatcgcagttgc
cacgcagatgtgcgcatcatgtacagacagcggtttttcgctgaaaactcaaccaaactc
gttaaaggcttcgactcagcagagcaggagaagaagtcctgttatttgaaagccctgtcg
cacatcgtcaataaccttcccagagaagtccagctcacagagcttcctgcattgctgcca
ctcctgctggaggcgctgtcgtgtccggatcaggcggttcagctgtccactctgtcctgc
ctgcagccggtgctgctggaacccccggcggccctcaggaaccagctggaggcgctgttc
tcccgcctgctggccctcgccaccagccctgctatgaaagtgagaattgcgtctctccgc
tgtgttcatgctctctctcgcctgcctgaacatatggtcctgccgttccgtgccagagtg
ctgaaagctcttgctgctcctctggacgacacaaagaggctggtgaggaaggaggctgtg
gcggctcgaggggaatggtttttgttaggaagccccggtggaagatga

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