Ctenopharyngodon idella (grass carp): 127523705
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Entry
127523705 CDS
T08802
Name
(RefSeq) integrin alpha-X-like
KO
K06461
integrin alpha M
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04145
Phagosome
cide04514
Cell adhesion molecules
cide04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127523705
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127523705
09142 Cell motility
04810 Regulation of actin cytoskeleton
127523705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127523705
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127523705
04515 Cell adhesion molecules [BR:
cide04515
]
127523705
04090 CD molecules [BR:
cide04090
]
127523705
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127523705
Membrane trafficking [BR:
cide04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127523705
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127523705
Cell adhesion molecules [BR:
cide04515
]
Integrins
Integrin alpha subunits
127523705
CD molecules [BR:
cide04090
]
Proteins
127523705
Glycosaminoglycan binding proteins [BR:
cide00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
127523705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
127523705
NCBI-ProteinID:
XP_051770706
LinkDB
All DBs
Position
12:3529410..3567491
Genome browser
AA seq
1138 aa
AA seq
DB search
MDHNFCIRLCIFCVSQSVMAFNIEPVTWKTFTASSQSQNVAFGYKVIQKDTSLIVSDPLI
QISQDKRGLIYNCAVTQGTCSSLKIDVPSEAVNMSLGLSMVQDQQSSKLAICGPTIPKKC
VSVTTYNGMCFIGENSVFKPPIPSSLRDCPGQIDIAFLLDGSGSVQSWNFITMKTFVTNV
IKRFTERDAQFAIAQYSSGCVIHYSFNQLKTQDSTWESKVTNIPYQNGGSTYTATAILKL
VRELFTTYGGARPSANKILLVITDGQSHDRSILTQASSEANAKSITRFAIGVGSAFESFS
AKQELNDIATDPDTDHVFKVTDFNALNNILQKLEENIIAIEGTQTSGDSSRMEFAQDGFS
TAFTSYGSVLMSAVGAFQWKGGYQEYLPDYSFQTGTEHESYLGYSLATATTSKTSFAILG
APRYKHKGQVFVSQLRTNQFKQLLDSPKPQIGSYFGAEVCVVDLNHNSNTDLLLVSAPTY
MESDREGIVFVYIFMREANLMFLDTLVGMAGQRGRFGSSLASPADLNGDGFMDVLIGAPL
EEDGQGSIYIFNGGDGVIIPKYSQRIVGSSVRPGLRFFGISLSQSSLDQSQDNLPDIAVG
SKGAVLLLRSRPIMLLETKITYNPTKIPTGDQTDCAKPLQNTLTVCFTMSRYKHGITGLA
ANINYTITLDAKRQKYRAYFPPKNRLHSDVMNIGVQEVCKSHAFFIEACSEDALNPLSNQ
LNFTFEGLPSANMQNLRPILLPEIKTSTDHNLDFEINCGTDNLCVDDLRMDFNFSGATNI
EVGIMQELNVTVFVENRGENSYNTLFTLKYPFGLSYRRFTSKQGRVECVSLDAERGVTLG
ETSCQISKPILKENAQVVFEITYSINKESTPGQNVTFTAEVTSGNDKHSIDSEFKKQKTI
DVKYAIYIALIRHENSTIHINFTSGKRDLMKPVQQIIKVQNDLRELTFKVFIRVPVKLGD
TDIWTNSNLQISGCKSEKMEKPVTTNFTLLDVIKNHHIVNCSVAVCAVFSCDVTLIKNER
KLYNISGNVSSGWIEQTGLRAAVFELVSSTSLDYDKSKYIFFSSDPQRTAPSLQINTQVE
VYEEANLTKEIIGGVIGGLLLLALLTAALYKAGFFKSQYKQMLQEAQGDAGGEPNMTQ
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggaccacaacttttgtatcagattatgcatcttttgtgtatctcagtcggtgatggct
tttaacatcgagcctgttacctggaaaactttcactgcgtcttcacagagtcaaaatgtt
gcctttggctataaggtgatacagaaagacacaagtctgattgtgagtgatcctttaatt
caaatcagtcaagataaaagaggattgatttataactgtgctgtcacacaaggaacctgc
tcatcactgaagattgatgtgccctcagaagcagtcaacatgtctcttggactttccatg
gttcaagatcaacagtcttcaaagctggcaatttgtggtccaaccattccaaagaaatgt
gtatcagttaccacctacaatggcatgtgcttcatcggtgaaaacagtgtgtttaaaccg
ccaataccaagctctctgagagactgtcctggtcagattgacatagcttttctattagat
ggatctgggagtgtgcagagttggaatttcattacgatgaagacttttgttacaaacgtg
atcaagcgttttactgagcgagatgcacagtttgctatagcacaatactccagtggttgt
gtaattcactacagtttcaatcaactcaaaactcaggacagcacatgggaatctaaagtg
acaaatataccgtaccaaaatggaggtagcacttacactgcgacagccatcttaaagctt
gtgagagagctatttacaacatatggaggggcaagaccatcagcaaataaaatattgctt
gttattactgatggacagtcacatgacaggagcatattgacacaggcatcatcagaggca
aacgcaaagagcataacacgatttgcgatcggggtcggcagtgcttttgaaagtttcagt
gcaaaacaggagttgaatgacattgctactgatccagacactgatcacgtgttcaaagtg
acagactttaatgcactgaataatattcttcaaaagctggaagaaaacattattgccatt
gaaggaacccagacttcaggtgattcctccagaatggagtttgcacaggatggattcagc
acagctttcacatcatatggaagcgtgttaatgagtgctgtgggagctttccagtggaaa
ggtggatatcaggaatatttgccagactactcctttcaaacaggcactgagcatgaaagc
tatctaggttattcactggctactgcaacaacgtcaaagaccagctttgctattctagga
gccccgagatacaaacataaaggacaagtctttgtatcacaactcagaaccaatcaattt
aaacagctgctggactctcccaagcctcagattggctcatattttggagctgaggtgtgt
gtggtggatttgaaccataactccaatacagatctacttttggtatcggcaccaacatac
atggagtctgaccgggagggcatagtgtttgtttacatcttcatgcgtgaggcaaattta
atgtttttggatacactggtgggcatggcaggtcagaggggtcggtttggctcttctctg
gccagtccagcagatctgaatggtgatggtttcatggatgtgctgattggagctccttta
gaggaggatggacagggcagcatctacatcttcaatgggggagatggagttatcattcca
aaatactcacagaggattgttgggtcatctgtgagaccaggtttgcggttctttgggatt
tcattgagtcagtcttctctagaccagagtcaagacaaccttcctgacattgctgttggg
tccaagggagcagttctgcttctcaggtccagacccatcatgctcttggaaaccaaaata
acttacaacccaaccaaaataccaaccggtgaccaaacagactgtgcgaagccattgcaa
aacaccctgactgtgtgcttcaccatgagcagatacaaacatggcataacaggtttggct
gcaaatattaattacaccataacgctggatgccaagcgacagaaatatcgagcatacttc
ccacccaaaaaccggctccacagtgatgtgatgaacattggggtgcaggaagtatgcaaa
agtcatgctttcttcatagaggcttgttcagaagatgctctcaacccgttgtccaatcag
ttaaatttcacatttgagggtcttccatcagcaaatatgcaaaatttgagaccaatactg
ctgccagagataaagacctccacagaccacaatctagattttgagataaactgtggaact
gataatttatgtgttgacgacctcagaatggatttcaatttctctggggctacaaacata
gaggttgggataatgcaggagctcaatgtgacagtgtttgtagagaacagaggagaaaac
tcatacaacactctcttcaccctcaagtacccctttggactttcctacaggagattcacg
tctaaacagggcagagtggagtgtgtgtctctggatgctgagcgaggagttacactggga
gaaacctcttgccaaatcagtaaacccatcctcaaggaaaacgctcaggttgtgtttgag
attacatacagtattaataaagaaagtacaccgggccaaaatgtgacgtttactgctgag
gtcacaagtggaaatgacaaacactcaatcgacagtgaatttaaaaaacagaaaaccatc
gatgtcaaatatgccatctatattgccttgataaggcatgaaaattccaccatccacatt
aattttacttcagggaaaagggatcttatgaaacccgtccagcagataataaaggttcag
aatgacctcagagaattaactttcaaagtgttcatcagagtaccagtgaaacttggtgat
actgacatctggactaattcaaatttgcaaatttctggctgtaaaagtgagaaaatggag
aagcctgttaccaccaattttacattgttggatgttattaaaaatcatcatatcgtgaac
tgctctgtggcggtgtgtgccgtgttcagctgtgacgtcactctcataaagaatgaaagg
aaactctataatatatctggcaatgtgagctctggatggatagagcagactggactcaga
gctgctgtgtttgagttggtcagttcaacatctctggattatgacaagagcaaatacatt
ttcttttcctctgatcctcaacgcactgcaccgtctctccagattaacactcaagtggag
gtgtatgaggaggcgaacctgaccaaagagatcattggaggggtgataggaggactgctg
ctactggctctcctcacagcggccctctataaggctgggttcttcaaaagccagtacaag
cagatgctgcaggaggcgcagggcgatgcaggaggagagccaaacatgacacaataa
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