Ctenopharyngodon idella (grass carp): 127523707
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Entry
127523707 CDS
T08802
Name
(RefSeq) integrin alpha-X-like isoform X1
KO
K06461
integrin alpha M
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04145
Phagosome
cide04514
Cell adhesion molecule (CAM) interaction
cide04517
IgSF CAM signaling
cide04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127523707
04517 IgSF CAM signaling
127523707
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127523707
09142 Cell motility
04810 Regulation of actin cytoskeleton
127523707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127523707
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127523707
04515 Cell adhesion molecules [BR:
cide04515
]
127523707
04090 CD molecules [BR:
cide04090
]
127523707
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127523707
Membrane trafficking [BR:
cide04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127523707
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127523707
Cell adhesion molecules [BR:
cide04515
]
Integrins
Integrin alpha subunits
127523707
CD molecules [BR:
cide04090
]
Proteins
127523707
Glycosaminoglycan binding proteins [BR:
cide00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
127523707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
127523707
NCBI-ProteinID:
XP_051770707
LinkDB
All DBs
Position
12:3606619..3663573
Genome browser
AA seq
1138 aa
AA seq
DB search
MDHNFCIRLYIFCVSQSVMAFNIEPVAWKTFTASSQSQNVAFGYKVIQKDTSLLVSDPLI
QLSQTLRGQIYRCTVTEGNCMPLPITVTNEAVNMSLGLSMSIDPQSSRAVVCGPTIPKNC
DEITTYNGMCFKISPDNVVSRSVPKTLRECPKSQIDIAFLLDGSGSVYYVDFNKMKDFVI
EMIKSFIDRDTQFAIAQFSTQCVIHYKFQQVKNTMWWKNAVNRISQQGEWTYTARAIGQL
VKELFVSNGGARPSASKILVVITDGESTDPNDLTAAVQQAQAKNIIRYAIGVGNAFNSYR
ARRELEIIASSPSNNHVFKVTDFDALESIREKLKENIIAIEGTQTSGDSSRMEFAQDGFS
AAFTSNTDMIMTAVGAFQWKGGYRLYKPNDNSDDFQAGSEHDSYLGYSLAIATLWGAKYA
VLGAPRHKHKGQVTVSRIDGKDLKQLDPPKPQIGSYFGAEVCVVDLNRDSITDLLLVSAP
TYMEPDREGKVFVFTPQSNFIFSGTLVGMAGQRGRFGSSLASPADLNGDGFMDVLIGAPL
EEDGQGSIYIFNGRNGVIIPKYSQRIVGSSVRPGLRFFGISLSQSSLDQTQDNLPDIAVG
SKGAVLLLRSRPIMLLETKVTYNPTKIPTGDQTDCTKPLQNTLTVCFTMSRYKHGITDLT
ANINYTITLDVKRQKYRAYFPPKNRLHSDVMNIGVQEACKSHAFFIEACSEDALNPLSNQ
LNFTFEGLPSANMQNLRPILLPEIKTSTDHNLDFEINCGTDNLCVDDLRMDFNFSGATNI
EVGIMQELNVTVFVENRGENSYNTLFTLKYPFGLSYRRFTSKQGRVECVSLDAERGVTLG
ETSCQISKPILKENTQVVFEITYSINKESTPGQNVTFTAEVRSGNDKHSIDSEFKKQKTI
DVKYAIYIALIRHENSTIHINFTSGKRDLMKPVQQIIKVQNDLRELTFKVFIRVPVKLDD
TDIWTNSNLQISGCKNENMEKPVITNFTLLGVIKNHRVVNCSVAMCAVFSCDVTLIKNEW
KLYYISGNVSSGWIEKTGLRAAVFQLVSSTSLDYDKSKYIFFSSDPQHTAPSLQINTQVE
VYEEANLTKEIIGGVIGGLLLLALITAALYKAGFFKSQYKQMLQEAQGDAGGEPNMTQ
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggaccacaacttctgtatcagattgtacatcttttgtgtatctcagtcggtgatggct
tttaacatcgagcctgttgcctggaaaactttcactgcgtcttcacagagtcaaaatgtt
gcctttggctataaggtgatacagaaagacacaagtctacttgtgagtgatcctttaata
caactcagtcaaactctgagaggacaaatatatcgctgtactgtcactgaaggaaactgc
atgccactgcccattactgtcaccaatgaggctgtcaacatgtcccttggactttcaatg
tctattgatcctcagtcttcaagagcagtggtttgtggtccaaccatacctaagaactgt
gatgaaataaccacttacaatggcatgtgctttaaaatcagtccagataatgttgtgagc
agatctgtgccaaagactctgagagaatgcccaaaatcacaaattgatattgctttttta
ttggatggatctggaagtgtatactatgtggattttaataagatgaaggattttgttata
gaaatgatcaaaagttttatagaccgtgatacacagtttgccattgcacagttttctaca
caatgtgtcattcattacaagtttcaacaagtcaaaaacactatgtggtggaaaaatgca
gtgaatcggatatctcaacagggagaatggacctacaccgcaagagctataggacaactt
gttaaagagttattcgtaagtaacggaggtgcaagaccatcagccagtaaaattttggtt
gttatcacggatggtgaatcaactgatccaaatgatttgactgcagctgttcaacaagca
caagctaaaaatataatacgatatgctattggggttggcaatgcttttaatagttacaga
gcaagaagggagctggaaattattgcatcttcaccctccaataatcatgtgttcaaagta
actgatttcgacgcgctggaaagcattcgtgaaaaactcaaagagaacattattgccatt
gaaggaacccagacctctggagattcatctcgaatggagtttgcacaggacgggtttagt
gcagcatttacatcaaatacagatatgataatgactgcagtgggagctttccagtggaag
ggtggatatcggctgtacaaaccaaatgataattcagatgactttcaagctggaagtgag
catgacagttatttaggttattccttggcaatagcaacactgtggggagcaaagtatgca
gtcctgggagcaccaagacacaagcataagggacaagtaactgtttcaagaattgatgga
aaggacttaaagcagttggatcctcctaagcctcagattggctcatattttggagctgag
gtgtgtgtggtggatttgaaccgtgactccattacagacctacttttggtatcggcccca
acatacatggagcctgaccgggagggaaaagtgtttgtcttcacgcctcagtcaaacttc
attttttcgggtacactggtgggcatggcaggtcagaggggtcggtttggctcttctctg
gccagtccagcagatctgaatggtgatggtttcatggatgtgctgattggagctccttta
gaggaggatggacagggcagcatctacatcttcaatgggagaaatggagttatcattcca
aaatactcacagaggattgttggatcgtctgtgcgaccaggtttgcggttctttgggatt
tcattgagtcagtcttctctagaccagactcaagacaaccttcctgacattgctgttggg
tccaagggagcagttctgcttctcaggtccagacccatcatgctcttggaaaccaaagta
acttacaacccaaccaaaataccaaccggtgaccaaacagactgtacaaagccattgcaa
aacaccctgactgtgtgcttcaccatgagcagatacaaacatggcataacagatttgact
gcaaatattaattacaccataacgctggatgtcaagcgacagaaatatagagcatacttc
ccacccaaaaaccggctccacagtgatgtgatgaacattggggtgcaggaagcatgcaaa
agtcatgctttcttcatagaggcttgttcagaagatgctctgaacccgttgtccaatcag
ttaaatttcacatttgagggtcttccatcagcaaatatgcaaaatttgagaccaatactg
ctgccagagataaagacctccacagaccacaatctagattttgagataaactgtggaact
gataatttatgtgttgacgacctcagaatggatttcaatttctctggggctacaaacata
gaggttgggataatgcaggagctcaatgtgacagtgtttgtagagaacagaggagaaaac
tcatacaacactctcttcaccctcaaatacccctttggactttcctacaggagattcacg
tctaaacagggcagagtggagtgtgtgtctctggatgctgagcgaggagttacactggga
gaaacctcttgccaaatcagtaaacccatcctcaaggaaaacactcaggttgtgtttgag
attacatacagtattaataaagaaagtacaccgggccaaaatgtgacgtttactgctgag
gtcagaagtggaaatgacaaacactcaatcgacagtgaatttaaaaaacagaaaaccatc
gatgtcaaatatgccatctatattgccttgataaggcatgaaaattccaccatccacatt
aattttacttcagggaaaagggatcttatgaaacccgtccagcagataataaaggttcag
aatgacctcagagaattaactttcaaagtgttcatcagagtaccagtgaaacttgatgat
actgacatctggactaattcaaatttgcaaatttctggctgtaaaaacgaaaacatggag
aagcctgttatcaccaattttacattgctgggcgttattaaaaatcatcgtgtggtgaac
tgctctgtggcgatgtgtgccgtgttcagctgtgacgtcactcttataaaaaatgaatgg
aaactctattatatatctggcaacgtgagctctggatggattgagaagactggactcaga
gctgctgtgtttcagttggtcagttcaacatctctggattatgacaagagcaaatacatt
ttcttttcctctgatcctcaacacactgcaccgtctctccagattaacactcaagtggag
gtgtatgaggaggcgaacctgaccaaagagatcattggaggggtgataggaggactgctg
ctactggctctcatcacagcggccctctataaggctgggttcttcaaaagccagtacaag
cagatgctgcaggaggcgcagggagatgcaggaggagagccaaacatgacacaataa
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