Ctenopharyngodon idella (grass carp): 127523731
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Entry
127523731 CDS
T08802
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127523731
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cide04031
]
127523731
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
127523731
GTP-binding proteins [BR:
cide04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
127523731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
127523731
NCBI-ProteinID:
XP_051770743
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All DBs
Position
12:complement(21261169..21273990)
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AA seq
286 aa
AA seq
DB search
MGHRADVKMNHRSSPAKAYDFLLKFLLVGDSDVGKGEILASLQDGSSESPYGYNMGIDYK
TTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEI
DEHAPGVPKILVGNRLHLAYKRQVTTEHAQAFAERLGVTFFEVSPLCNFNITESFTELAR
IVLMRHGMERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPVALKSHLKSFSMANGLN
ARMMHGRSYSVIASSAKKRNGTKKSKIIYPPLSPSQNCARTSCKIS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatcgggctgatgtgaagatgaaccacaggagcagcccagcaaaagcttatgat
ttcctcctgaaattcctgctggttggagacagtgatgttgggaaaggggagatactggcc
agtctacaggatgggtccagtgaatcaccctatggatacaatatgggaattgactacaag
acaactactatactcctcgatggacgtagagtcaagctccagctttgggacacctcagga
caaggcagattctgcaccatattccgctcatattccagaggagcacagggtgttatcctt
gtatatgacatcacaaaccggtggtcttttgatggcatcgacagatggattaaagagatt
gatgagcatgcaccaggtgttcccaagatcctggtgggaaacagacttcacctggcctat
aagcgtcaggtgaccactgagcacgcccaggcctttgcagagcgactaggtgtcacattt
ttcgaggtcagccctctctgtaacttcaacattactgagtccttcactgagttggcccga
attgtgctcatgaggcatggtatggagcgactttggagacccaataaagtgttgagtctg
caggacctgtgctgtcgttctatcgtttcctgcactccagtgcaccttgtggacaaactt
ccacttcctgttgccttaaagagccatctgaagtccttctccatggccaacggcctcaac
gccaggatgatgcacggacgttcctactcggtcatagccagcagcgctaaaaaaaggaac
ggaaccaaaaaatccaaaatcatctatccgccactgagcccatcccagaactgcgcacgg
acgagctgcaagatttcatag
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