Ctenopharyngodon idella (grass carp): 127523799
Help
Entry
127523799 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: vinculin-like
KO
K05700
vinculin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04517
IgSF CAM signaling
cide04518
Integrin signaling
cide04519
Cadherin signaling
cide04520
Adherens junction
cide04810
Regulation of actin cytoskeleton
cide04820
Cytoskeleton in muscle cells
cide05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127523799
04518 Integrin signaling
127523799
04519 Cadherin signaling
127523799
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127523799
04520 Adherens junction
127523799
09142 Cell motility
04820 Cytoskeleton in muscle cells
127523799
04810 Regulation of actin cytoskeleton
127523799
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127523799
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127523799
04147 Exosome [BR:
cide04147
]
127523799
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127523799
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127523799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
127523799
NCBI-ProteinID:
XP_051770847
LinkDB
All DBs
Position
12
Genome browser
AA seq
1067 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDAIMRRDMPPAFIKVENACTKLVQAAQMLKSDPYSVQARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTRTSQGKGVEEALKNRNFTVEKMSTE
INEIIRVLQLTSWDEDAWANKDTEAMKRALALIDSKMAQAKNWLRDPHAQPGDAGEQAIR
QILDEAGKVGELCAGKERRDIVGTAKTLGQITEQVSEMRARGQGASPVAMQKAQQVSQGL
DVLTGKVENAARKLEAMTGSKQAIAKRIDAAQSWLADPHGGPEGEENIKALLGEARKIAD
LCEDPKEREDILRNMGEIAGLTAKLSDLKKAGKGDTPEARALAKQIATALQNLQSKTSKA
VANTRPAKAAVHLEGKIEQAQRWIDNPTLDDSGVGQAAIRGLVAEGRRLANALPASQRHE
LLGKCEEVEHLMAQLAELAARGEGDGPQARAIAHQLQDTLKELKGKMQEAMTQEVSDIFS
DTTTPVKLLAVAATAPPDAPNREEVFEERAANFENHAGRLGATAEKAAAVGTANKSTVEG
IQAAVKSARDLTPQVISAARILLKNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTR
SLLDASEEAIKKDLDKCQVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
ETVKAASDELSRTISPMVMDAKAVAANIQDQGLQRGFLDSGFKILGAVAKVREAFQPQEP
DFPPPPPPDLEHLQISDNAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQQAGEMVSEPMM
VAARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGSGGNKRALIQCAKDIAKASD
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacgaagacgatagagagtatcctggagccggtggctcagcagatc
tctcatctggtcatcatgcatgaggagggagaggtggacgggaaagccatcccggatctc
accgctcccgtagccgccgtgcaggcagctgtcagcaacctggtccgggtgggcaaagag
acggttcagaccactgaggatgccatcatgaggagagacatgcctcctgcctttatcaag
gttgagaatgcatgcactaaactggtgcaggccgctcagatgttgaagtccgacccgtat
tctgtccaagccagagattatctgatcgacggttcccgcgggatcctctccggcacctct
gacctgctgctgacgttcgatgaggccgaggtccgtaaaatcatccgtgtgtgtaaaggg
attctggagtatctgacggtcgctgaggtggtggagtcgatggaagatctgattacttac
accaagaacctgggaccaggcatgacaaagatggccaagatgattgacgagcgacagcag
gagttaactcatcaggagcacagagtcatgctggtcaactccatgaacaccgtgaaggag
ctgctgcccgttctcatctcaggcattaagatcttcgtaacgaccaggacgtctcaaggg
aagggtgtggaggaggcgctgaagaacaggaacttcaccgtggagaagatgagcacagag
atcaatgaaatcatccgcgtgctgcagctcacgtcctgggacgaggacgcctgggccaat
aaggacaccgaggccatgaagagagcgctggctctgatcgattccaaaatggcccaggcg
aagaactggctccgagacccgcacgcccagccaggtgacgcgggcgaacaggccattcgt
cagatcctggacgaggcgggtaaagttggcgaactctgcgctgggaaagagagacgagac
attgtgggaacagccaaaacgcttggacagatcaccgagcaggtgtccgagatgcgggcc
aggggtcagggcgcgagtccagtggccatgcagaaagcacagcaggtgtctcagggtttg
gacgtcctgacggggaaagtggaaaatgcggcacgtaaattggaggccatgaccggctcg
aaacaagccatcgccaagagaatcgacgccgctcagagctggctggcagaccctcacgga
ggtcctgagggagaggagaacatcaaggctcttctgggagaagcgaggaaaatcgcggat
ctctgcgaagatcccaaagagcgagaggacatcctgcgcaacatgggcgagatcgcgggt
ctcactgccaaactctccgatctcaagaaagcaggtaagggcgatacccctgaggctcga
gcgctggccaagcagatcgccacagctctgcagaaccttcagtccaaaaccagcaaagcc
gtggccaacactcgtccggccaaagcagccgttcacctggagggaaagatcgagcaggct
cagagatggatcgacaaccccacgctggacgacagcggagtcggtcaggctgctattcgt
gggctggttgccgaggggcgtcgcctggccaatgcgttgccggcgtctcagaggcatgag
ctgctgggtaaatgtgaggaggtggagcatctgatggcgcagttagccgagctggcggcc
cgcggagagggagacggcccacaggcccgcgccatcgctcatcagctgcaggacactctc
aaagagctgaagggtaaaatgcaggaagccatgacacaggaagtgtctgacatcttcagc
gacacgaccacacctgtcaaactattggctgtggcagcgacggccccgccagacgcgccc
aacagagaggaggtgtttgaggagagggccgcgaactttgagaatcacgcgggccgtctg
ggcgccacagcggagaaggcagccgccgtcggcacggccaacaagagcacggtggaggga
atccaggccgccgtcaaatcagccagagatctgacgccacaggtcatctccgcagctcga
atcctcctgaagaatcctggaaaccaggcggcttacgagcactttgagaccatgaagaat
cagtggatcgacaatgtcgagaaaatgacaggtctggtggatgaagcgattgacaccagg
tctctgttggatgcatcagaagaagccataaagaaagatctggacaagtgtcaggtagct
atggccaatcaccagcctcagatgctagtcgccggggcaaccagcatcgcccgacgagcc
aatcggatcctgctggtggcaaaacgagaggtggagaactcagaggacccgaagttcaga
gagactgtgaaagcggcttccgacgagctcagcaggaccatctcaccgatggtcatggac
gccaaggccgtggccgccaacatacaggaccaaggccttcagaggggcttcctagactca
ggttttaagatcctgggtgccgtggctaaagtcagagaggcgttccagccacaggagccg
gacttccctcctcctcctcctccagacctggagcacctgcagataagcgacaacgccgcc
ccgccaaaaccgcccctgccggagggtgaagtgcctcctcccagacctccaccgcctgag
gagaaggacgaggagttccctgagcagcaggctggagaaatggtcagcgaacccatgatg
gtggccgcccgacagctgcacgacgaggcccgcaagtggtccagcaagggtaatgacatc
atcggtgccgctaagcgcatggctctgctgatggccgagatgtctcgactggtccgagga
agcggtgggaataagagggcgctcatccagtgtgccaaagacatcgccaaagcctctgac
gaggtcacgcgccttgccaaggaggtcgccaagcagtgcacggacaaacgcatacgaacc
aacctgctgcaggtgtgtgagaggattcctaccatcagcacacagctgaagattctctcc
actgtgaaggccaccatgttgggacgcaccaacatcagtgaggaggaatcggagcaggcc
acagagatgctggtccataacgctcagaacctgatgcagtccgtgaaggagacggtgagg
gaagctgaggccgcctccatcaagatccgcacagatgccggattcaccctgcgctgggtc
cgcaagacaccctggtaccagtga
DBGET
integrated database retrieval system
