Ctenopharyngodon idella (grass carp): 127523830
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Entry
127523830 CDS
T08802
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127523830
Membrane trafficking [BR:
cide04131
]
Protein recycling
Others
Retriever complex
127523830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
127523830
NCBI-ProteinID:
XP_051770886
LinkDB
All DBs
Position
12:8115795..8136377
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AA seq
1010 aa
AA seq
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MASVQWHSRGRKYESEWQVCRLEVSAVEFSDYHPLKAITVTDSKSRRSGRKGSTSSSSSS
SSSVALDPLSSMLDGTDPLSLFAAASETPTLSHSISAGELGRKRREKEEEVGLDFEPWSS
KRGEILSRFTTTEKLSINLFMGSDKSKASSPSSAVSEKVRTRLEELDDLEEGSQRELLNL
SQQDYVNRIEELNQSLKEAWGSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILD
TFGGLVYDRIWTMCADPHPLPESFSADDVNDTAKETCLNWFFKIASIRELVPRLYVEAAL
LKCNRFLTKSGIQETLQRLTAMIRGIGDPLVAVYARAYLCRSSIISPTVENETVSVPAGP
DWHGMERLSNESGLGQWWKSGYTFKFYMVGMEVAPHLKDSLNKNFFDLLASFRQIHGESV
QNQLVLQRVEIPIYLTLYSPAIHWILQCVAYRAPEVLLTEMMDRCKKLGNNALLLNSVMW
AFRAEFVAARATDFIGMIKDCDEAGFPKHLLFASLGRSLSCADPPESERLSILNEAWKVI
TKVRSPRDYINCAEIWVEFTCRHFTKREVNTVLTDIIKHMTPDRAFEDAYPQLQSVINKI
LTYFHDFSVLFSMEKFLPFLDMFQKDSVRVEVCKSIMEVFIKHQQEATRDPVILNALLHI
CKTMHDSVNALTLDDEKRSLALLINGFIRMVSFGRDFEQQLSFCVEARATFCNLEPVIIH
LIHTVNQLAMETRRVMKGNHSRKTAAFVRACAAYSFITIPSLTSIFSRLNLYLLSGQVAL
ANQCLSQADAFLKAAVSILPEVPRTISIEGKQRSSEPFLLEFINNFLSTLLVVPDHPEQG
VLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQESYLYTIPKVDSNETLYGGD
PKFIAEINKLCETLIGQVLDHLKTLGRDEGVRRQASLAFSLFGCLLAHGDLRNNKLNQLA
VNLWNLSHKHGFCETRTSVRTLEYIKHQAQQADMNHLSDMTSRLSLQSRA
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagttcagtggcactctcggggccgtaaatatgagagtgagtggcaggtgtgt
cgtttggaggtttcagcagtggagttcagtgactatcatccactcaaagccatcacggtg
acagattctaaatctcgccgtagtgggcggaaaggcagcacctcctcctcatcttcttcc
tctagttctgtggctctggatccactcagctccatgctggatgggaccgacccactgtct
ctcttcgctgcggcgtctgagaccccaactctgtcacacagcatctctgctggggagttg
gggcggaaacgtcgggagaaagaggaggaagtgggcttagactttgagccgtggtcatct
aaacgtggagaaatcctttctagattcaccaccacagagaaactgtctataaacctcttc
atgggctcagacaagagtaaagcatccagtcccagctcagccgtgtcagagaaggtgcgc
actcgtctggaggaactggacgacttggaggagggctcacagagggagctgttgaacctg
tcccagcaggactatgtgaaccgcattgaagagctcaaccagtctctgaaggaggcatgg
ggttcagaccagaaagtcaaagccctgaaaatcgtcatccagtgctccaagctgctctct
gatacatcagtaattcagttctaccccagcaagtttgttctcatcacagatatcctggac
acctttggtggtctggtgtatgataggatctggaccatgtgtgctgaccctcatccgtta
ccagaatcgttctctgctgatgatgtgaatgacacagccaaagagacgtgtctcaactgg
ttctttaaaatcgcctccatcagagagcttgtccctcgactatatgttgaagctgctctt
ctgaaatgcaaccgcttcttgacaaagtctgggattcaggagacactgcagagactgaca
gcgatgatcagaggaataggagacccgctggtggctgtatatgcacgggcgtatttatgc
aggagctccattatcagccccacagtggaaaatgaaaccgtatccgtaccagctgggccg
gattggcatggaatggagcggttaagcaatgagagcggtttgggccaatggtggaaaagt
ggctatactttcaaattttacatggttgggatggaggtggcgccgcatctgaaggatagt
ctcaataagaatttctttgacctgctggcctcgttccgtcaaattcatggtgaaagtgtg
cagaatcagctggtgctgcagcgggtggagattcccatctatctgaccctctattctcct
gccatacactggatcctgcagtgcgtggcatacagagcaccagaggttctgctaacagag
atgatggacagatgcaagaagttgggcaacaatgctctcctgctgaactctgtcatgtgg
gcattccgggcagaatttgttgcagcgagagctacagactttattggcatgatcaaagac
tgcgatgaagctggatttcccaagcacttgttgtttgcatctctgggtcgcagtctgtcc
tgtgctgaccctccagagagtgaaagactctccatactcaatgaagcatggaaggtcatc
actaaagtgcgcagcccaagggattacatcaactgtgctgagatctgggtggagtttacc
tgccgtcatttcacaaaacgggaggtgaacacggttcttactgacatcatcaaacacatg
actccagacagagctttcgaggatgcatatccacagctgcagtcagtgataaacaagatc
ctcacctacttccatgacttctctgtgctcttctctatggagaagtttttgccctttctg
gacatgttccagaaagacagcgtgagggtggaggtgtgtaaatcaatcatggaggtcttc
atcaaacaccagcaggaagcaacgagagaccccgtcatcctcaacgcgttgctgcacatc
tgtaagaccatgcacgactctgtcaatgctctaactctagatgatgagaaaagatctctg
gctctgctgatcaatggatttattcgtatggtgtctttcgggagggactttgaacagcag
ttgagtttctgtgtggaagcccgagcgaccttctgtaatctagagcccgtcatcattcac
ctgatacatacggtgaatcagttagccatggagaccagacgtgtgatgaaaggaaatcac
tcacgtaaaacggctgcttttgtcagggcttgtgctgcctacagtttcatcaccattcca
tctctcacgagtatcttcagtcgtctcaacctctacttgctctctggacaagtagcgctg
gccaaccagtgtttgtcccaagcggacgcgtttctaaaggcagctgtcagtattttgccg
gaagtcccgcgtactatcagcattgagggaaaacagcgatcatcagagcccttccttctt
gaattcattaacaacttcctttccacactgctcgtagtgccggatcacccggagcagggt
gtgctgtatctggtgcgagggctcttgaatatggtgcaggactacacctgggaggacaac
agtgatgctaaggtccgcgtctacatcagcgctttaccattactagcagcaatgagccag
gaaagctatctctacaccattcctaaagtggattccaatgaaaccctctatggaggagat
cccaagttcatcgcagagatcaacaagttgtgtgagactctgatcggtcaggttttggat
catttaaagactctgggccgagatgagggagtgcgcaggcaggccagtctggctttctct
ctgtttggctgtctgttggctcatggtgatctacggaacaacaaactcaatcagctggct
gtcaacctgtggaacctcagccacaaacacggcttctgtgagacacgcacatcggttcgg
actctagagtacatcaaacatcaggcacagcaggcagacatgaaccatctctctgacatg
acatcacgtctgtctctgcagtcccgagcctga
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