Ctenopharyngodon idella (grass carp): 127523842
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Entry
127523842 CDS
T08802
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04080
Neuroactive ligand-receptor interaction
cide04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127523842
04081 Hormone signaling
127523842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127523842
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cide03310
]
127523842
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127523842
Nuclear receptors [BR:
cide03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
127523842
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127523842
NCBI-ProteinID:
XP_051770907
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Position
12:complement(15362669..15514759)
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AA seq
409 aa
AA seq
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MEHMPKEQDPNQSEGEEKRWLDGPKRKRKNSQCSVKSMSGYIPSYLEKDEPCVVCGDKAT
GYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKITRNQCQLCRFKKCIAVGMA
MDLVLDDSKRVAKRRLIEENREKRKKEEMVKSLQNRPEPTSSEWELIRMVTEAHRHTNAQ
GSHWKQKRKFLPEDIGQSPVAPTSDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSE
LPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGVVSDAIFD
LGKSLAQFNLDDTEVALLQAVLLMSSDRTGLTCVEKIEKCQEMYLLAFEHYINYRKHNIP
HFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQDV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaacacatgcccaaggagcaagacccaaaccaatcagagggagaagagaaacggtgg
ctcgatggcccgaaaagaaagagaaagaacagccagtgttcggtgaagagcatgtctggg
tacatccccagctatctggagaaggatgagccatgtgtggtgtgtggagacaaagctaca
ggctaccactaccgctgcatcacctgtgagggctgtaagggattcttcaggcgcaccatt
cagaagaacctccacccctcttactcctgtaaatatgatggctgctgcatcatcgacaag
atcacccgcaaccagtgtcagctctgccgcttcaagaaatgcatcgccgtgggcatggcc
atggatctggttctggacgactccaagcgggtcgcgaaacggcgcttgattgaggagaac
cgtgagaagcggaaaaaggaggagatggtcaagtccctgcagaatcgtccagagcccacc
agctcagagtgggagctgatccgtatggtgacagaagctcaccgccacaccaatgcacag
ggctctcactggaaacagaaacgcaagttcctgccggaggacataggacagtctccagtg
gcccccacatcagacggtgacaaagtggatttggaggccttcagcgagtttaccaagatc
attaccccagccatcacacgcgttgttgactttgccaaaaaactgcccatgttttcggag
ctgccttgtgaggatcagatcatcctgctgaagggctgctgtatggagattatgtcccta
cgagctgcagttcgatacgacccagaaagcgagaccttgaccctgagcggggagatggct
gtcaaacgagagcagcttaagaatggagggctgggcgttgtgtctgacgccatcttcgac
ttgggcaagagtctggctcagttcaacctggatgatacagaggtggccctgctgcaggcc
gtgctgcttatgagctcagatcgcacaggcctgacatgtgtggagaagatcgagaagtgt
caagagatgtacctcctagcgttcgaacactacatcaactatcgcaagcacaacattccc
catttctggcccaagctgctgatgaaggtgacggacctgcgcatgatcggagcctgccac
gccagccgcttcctgcacatgaaggtggaatgccccactgaactcttccccccacttttc
ctggaggtctttgaggatcaggatgtgtga
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