Ctenopharyngodon idella (grass carp): 127523850
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Entry
127523850 CDS
T08802
Name
(RefSeq) integrin beta-3b
KO
K06493
integrin beta 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03266
Virion - Herpesvirus
cide04081
Hormone signaling
cide04145
Phagosome
cide04148
Efferocytosis
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
cide04810
Regulation of actin cytoskeleton
cide04820
Cytoskeleton in muscle cells
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
127523850
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
127523850
04512 ECM-receptor interaction
127523850
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127523850
04148 Efferocytosis
127523850
09144 Cellular community - eukaryotes
04510 Focal adhesion
127523850
09142 Cell motility
04820 Cytoskeleton in muscle cells
127523850
04810 Regulation of actin cytoskeleton
127523850
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127523850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127523850
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127523850
04515 Cell adhesion molecules [BR:
cide04515
]
127523850
04090 CD molecules [BR:
cide04090
]
127523850
Membrane trafficking [BR:
cide04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127523850
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127523850
Cell adhesion molecules [BR:
cide04515
]
Integrins
Integrin beta subunits
127523850
CD molecules [BR:
cide04090
]
Proteins
127523850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_integrin
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
127523850
NCBI-ProteinID:
XP_051770929
LinkDB
All DBs
Position
12:17979017..17995498
Genome browser
AA seq
790 aa
AA seq
DB search
MEKISSKFLSLWIYCVIVFLTDAGLGSNICTSRGASTCQQCLAVHPTCAWCFQEDFGQDV
PGSSRCDLKKNLIDAGCRRGALEYPTSKMQVTEDKDLSDKASGSTTDVTQIKPQSINISL
RPDDSQIFTLKVRQVEDYPVDLYYLMDLSYSMNDDLSQLRRLGRGLAEEMSKTTSNLRMG
FGAFVDKPVSPYMYISPQEAVLNPCYSIPYKCQPQFGYRHVLSLTEEVGRFTEEVKKQKV
SRNRDAPEGGFDAIIQAAVCKEKIGWRPGASHLLVFTTDAKTHVALDGRLAGIVRPNDGQ
CYVGTDNIYNMSTTMDYPSLALITEKMSENNINLIFAVTSHVESLYKNYSELIPGTAVGT
LSEDSHNVIQLIQDAYAKLRSKVELELLNVPEELSLTFNATCLNGEVIPGLKSCSGLKRG
DTVSFSVEARARGCPKEKHKTFTIKPVGFKDTLQITVNFECECKCQAKAEPDSPICHHGN
GTYECGICLCNPGRLGPRCECAEGDYSPTEQDACTGPDKVICSGRGDCVCGQCVCHNNDF
GKVWGKRCECDDFSCLRYKGELCSGHGTCSCGFCQCDPDWKGENCNCSTRTDTCMSSLGL
LCSGRGQCVCGSCECTQPGAYGSTCDKCPTCPDACTLKKDCVECKHFKRGKLFDDETCSR
ICRDEIRLVDDLVFHDKNAVNCTYKDEDDCVQRFQYYEDNSGKSILSLVKEPDCPKGPDI
LVVLLSVAGAILFLGLAALLIWKLLITIHDRREFAKFEEERARAKWETGHNPLYKGATST
FTNITYRGKD
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatttcatccaaattcttaagcttatggatttattgtgtgattgtattccta
actgatgctggactaggctccaacatctgcacttctcgaggagccagtacatgtcagcag
tgcctggcagtgcatcctacctgtgcctggtgctttcaggaggattttggacaggatgtg
cctggctcctcccgatgtgacctgaagaagaacctcatagatgcaggatgcaggagagga
gctctggagtatcccaccagcaaaatgcaggtgacagaggacaaggatctaagtgacaag
gcctcgggatccaccaccgacgtcacccagatcaaacctcagagcataaacatctctctg
agacctgatgattcccagatcttcacactaaaggtccgtcaggttgaggactacccagtg
gacttgtattatctgatggacctgtcctactccatgaatgacgacttgtctcagttgcgg
aggctggggcgaggcctggctgaagagatgagtaaaaccaccagtaatctgcgcatgggc
tttggggctttcgtggataaacctgtgtccccgtacatgtacatctcccctcaagaggcc
gtgttaaatccctgttactcaatcccatacaaatgccagcctcagtttggctacagacat
gttctgtctctgacggaggaggtgggccgctttacagaggaagtgaagaaacagaaggtg
tctcggaacagggatgccccagagggaggcttcgacgccatcatacaggcagccgtgtgc
aaggagaaaattggttggagaccaggtgcatctcatttactggttttcaccacggatgcc
aagacacatgtggcactggatgggcgcctggcgggaattgtgcgacccaatgacggccaa
tgctatgtgggaacagataacatctacaatatgtctacaactatggactatccatcactg
gcattaatcacagagaaaatgtcagaaaacaatataaatctcatctttgctgtgactagc
catgtggaatcactttataagaactacagtgagctgatccctggcactgcagtgggaacg
ctgtccgaggattctcataatgtcatccagctgatccaggatgcatatgctaaactgcgc
tctaaggttgagctggagctcttgaatgtcccggaagagctcagtctgacatttaatgcc
acatgtcttaatggagaggtcatccctgggctaaaatcctgctctggcctcaaaagagga
gataccgtgtcctttagcgtagaagctcgggccaggggctgtcccaaggagaagcacaag
acctttaccatcaaaccagtgggctttaaagacacgttgcagatcacagtcaactttgag
tgtgagtgtaaatgccaagctaaggcagagcccgacagtcccatctgtcaccacggcaat
ggcacctatgagtgtggaatctgcctgtgtaacccaggacgattgggtcccaggtgtgag
tgtgcagaaggggactacagccccaccgagcaggatgcctgcacaggtcctgacaaggta
atctgcagcggccgtggagactgcgtgtgcggccaatgtgtgtgccacaataatgatttc
ggcaaggtgtgggggaagaggtgtgagtgtgacgatttcagctgcttgcggtacaaagga
gagctctgctcaggtcatggcacttgttcctgtggtttttgccagtgtgatccagactgg
aagggggagaactgcaattgttctactcgtacagacacctgtatgtccagcttggggctg
ctgtgcagcggtcgtggtcagtgtgtgtgtgggagctgtgagtgcactcagcctggggcc
tacggctccacctgcgacaaatgccccacctgccctgacgcctgcaccctgaagaaggac
tgtgtagagtgtaagcactttaagagggggaaactcttcgatgatgaaacctgctctcga
atctgcagagatgaaatcagactggtggatgatctggtgttccatgataaaaatgcagta
aattgcacctataaggatgaggatgactgcgtgcaaaggtttcagtactatgaggacaac
agtggcaaatccatcttatctctggtcaaagagccagactgccctaaaggccctgatatc
ttggtggtgcttctgtcagtagctggtgccatcttgttcttgggtctggccgccctgctt
atctggaaactgcttatcaccatccatgatcgccgtgaatttgctaagttcgaggaggag
cgggcacgtgcaaagtgggaaacgggccacaaccccctctacaaaggtgccacatcaaca
ttcacgaacatcacatatcgaggcaaggactga
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