Ctenopharyngodon idella (grass carp): 127523884
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Entry
127523884 CDS
T08802
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03020
RNA polymerase
cide04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127523884
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
127523884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127523884
Enzymes [BR:
cide01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127523884
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
127523884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
127523884
NCBI-ProteinID:
XP_051770981
LinkDB
All DBs
Position
12:29143363..29173528
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLELPCFHIGYFKAIVGILQMICKTCSHILLAKE
EKLQFLDYLRRPGLAYLQKRGLKKKISDKCRKKTICVNCNAFNGPVKKCGLLKIIHEKYK
TTKKVIDPMVSDFLQSFDVAIEHNKEVESLLTRAQENLNPLVVLNLFRRIPNEDVPLLLM
NPESGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANIELMRKLVRNGPDLHPGANF
IQQRHMQMKRFLKYGNREKMAQELKYGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRTKACQIVASILVGKDEKIKISLPHPAILKPIRLWTGKQI
FSLILKPSKSCPVKANLRTKGKQYCGKGEDLCSNDSFVVIQNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQQEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQELLDDG
YKKCDEYIEALKTGRLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVFGCPGEPALSRNELVLTTDSIMKRKDFLC
CKDTFLEEIRKFIKTISERIKKTRDKYGINDNGTTEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIISANLDTDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICTSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKQQLPKVV
VQGIPEVARAVIHIDEQSGKQKFKLLVEGDNLRAVMATHGVNGNRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHSATKDPNPPRRPLLFD
SPDFHIPLAP
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacggatgtggccaaaaagataagtcacatctgtttt
ggcatgaaatcagcagagcagatgagacaacaggctcatattcaggtggtcagcaagaac
ctctacagccaagacaccagccacacaccgctgcagtatggagtcctggaccaccgcatg
ggtaccagcgagaaggacagaccatgtgaaacctgtgggaagaaccttgctgactgtctc
ggccactacggatatctggatctggagctgccctgctttcatatcggatattttaaagct
attgttgggatcctacagatgatctgtaagacgtgttctcacatccttctcgccaaagag
gaaaagcttcagtttctggattacttgcgtagacctggactggcgtacctgcagaagcgc
ggcctcaagaagaagatctctgacaaatgcaggaagaagaccatatgcgtgaactgcaac
gcgtttaacggccccgtaaagaaatgtggcttgctgaagatcattcatgaaaagtataag
accacaaagaaagtcatcgatcccatggtgtcggatttcctccagtcgtttgatgtggcc
attgaacacaacaaagaagtggagtcactactgaccagagcacaggaaaacctcaatcct
ctggtcgtgttgaatctcttccggaggattccaaacgaggacgttcctcttctgctgatg
aatccagaatccggaaaacccgctgacctcatcctgacgcgcctgttagtgccgcccctc
tgcatccggccctctgtcgtcagcgacctcaaatcaggcactaatgaagatgatctgacc
atgaagctaacggaaatcatcttcctcaacgacgtcatcaagaagcaccgcatgtcagga
gccaaaacccagatgatcatggaggactgggacttcctgcagctccagtgcgctctgtac
atcaacagcgagctgtcgggcatcccgctcaacatggcacccaagaaatggacccgcggc
tttgtgcagagactcaagggaaaacaggggcggtttcgtggtaacctgtctggaaagaga
gtggatttctcaggcagaacggtcatctctcctgacccaaatctgaggatcgatgaggtc
gctgtacctgtgcacgtcgccaaaatcctcacctacccagagaaggtaaataaagccaac
attgagctgatgaggaagctagtgcgtaacggtcctgatcttcacccaggagcaaacttc
attcaacagagacacatgcagatgaagaggttcttgaagtacggtaaccgagagaagatg
gctcaagagctgaagtacggtgacgtggttgagagacacatgattgatggcgacattgtg
ctgtttaaccggcagccgtctctgcacaaactcagtatcatggctcatattgcgcgcgtg
aaacctcatcggacattccgtttcaacgagtgcgtgtgcacgccgtacaatgctgacttt
gacggagacgagatgaaccttcacctgccgcagacagaagaagctaaagctgaagctctc
atcctcatggggacaaaggcaaatctggtcactcccagaaacggtgagccgctgatcgca
gccattcaggacttcctgacaggtgcctacctgctcacgctcaaagacactttcttcgac
cgaaccaaagcctgtcagatcgttgcttccatcctggtggggaaagacgagaaaatcaag
atctccctccctcatcctgctattctcaagccgatcaggctgtggacggggaagcagatc
tttagtctgatactcaagcccagtaaaagctgtccagtgaaggccaacctgcgcaccaaa
ggcaaacagtactgcggtaaaggggaggatctgtgttccaatgattcatttgtggtgatc
cagaacagtgagctgatgtgcggcagtatggataaaggaactctgggatccggatccaag
aacaacatcttctacatcctattgcgagactggggtcagcaggaggccgcggatgccatg
tcacgtctggcccgtctggctcccgtgtacctctcaaatcgaggcttctctattggtatc
ggagacgtgacgcctggacaaggactcttgaaggccaaacaggaactactggacgatgga
tataagaaatgtgatgaatatatcgaagccctgaagacaggcagattacagcagcagccg
ggctgcaccgctgaggaaacgctggaggcgttaatcctgaaggagctgtctgtcatcaga
gatcacgctggcagtgcgtgtttgagagaactggacaaaagcaacagtccgttgattatg
gctctgtgtggatcgaaaggttcattcattaacatctcacagatgatcgcttgcgtcggg
cagcaggccatcagcggctctcgtgttcctgatggatttgagaaccgttcgctgcctcac
tttgaaaagcactccaaactccctgctgcgaagggctttgtggcagacagcttttattct
ggtctgacccccactgagttcttctttcacactatggctggtagagaaggtctggtcgac
accgccgtaaaaacagcagagacgggatacatgcagaggcgtctggtgaagtctctggag
gacttgtgctctcagtacgatctgacggtgcgcagctccaccggtgacatcatacagttc
atctacggcggagacggactcgatcccgcggccatggagggaaaagacgagccgctggag
ttcaaaagagtcctcgacaacatcagagcggtgttcggctgtccaggtgagcctgcgctg
agcagaaacgagctggttttgaccaccgactccatcatgaagagaaaagacttcctgtgc
tgtaaagacacatttctggaggaaatcagaaagttcataaaaacaatttcggagagaatc
aaaaagacacgtgacaagtacggcatcaatgacaatggaacaacagagcctaaagttctg
taccagttagacaggatcactccgacccagctggagaagtttctggaaacctgcagagac
aaatatatgagggcacagatggagccggggtctgccgtcggagcgctgtgtgcccagagc
atcggggagccgggcactcagatgaccctcaagacgtttcacttcgctggagtggcttcc
atgaacataactctgggagtcccgagaatcaaagagatcatcaatgcatccaagaatatc
agtacgcccatcataagtgccaacctggatacagatgatgatccagacttcgctcggctg
gtgaaaggacgcattgagaaaactctactgggagagatttctgagtacattgaggaggtt
ttcctgcctgatgattgtttcatcctggtgaagctgtccctagagaggattcgtcttctg
agattggaggtgaacgcagagaccgtacgatactccatctgcacgtcaaagctgcgggtg
aagccgggtgatatcgcggttcacggagaggccgtggtctgtgtgtctccgagagaaaac
agcaagagctccatgtactacgtcctgcagtcgctcaaacagcagcttcctaaggtggtg
gtccagggcatccctgaagtggcgcgtgccgtcattcacattgatgagcagagtgggaaa
cagaagttcaaactgctagtggagggagacaatctcagggctgtcatggcaacacacggc
gtcaacggcaacagaacaacatccaacaacacttatgaggtcgagaagacgttaggcatc
gaagcagcgagatcgaccatcattaatgagatccagtacaccatggtgaaccacggtatg
agcatcgaccgcaggcacgtcatgctgctggcggatctcatgtcttataagggtgagatt
ctgggcatcacccgcttcggtctggctaagatgaaggagagcgttctcatgctggcgtcc
tttgagaagacggcggatcatctgtttgatgcggcgtatttcgggcagaaagactcggtc
tgcggtgtatctgagtgtattataatgggaatccccatgaatatcggcactggactcttt
aaacttttacacagcgccacaaaggaccccaatcccccgcgcagaccactgctctttgac
agtcctgatttccacatccctttggctccataa
DBGET
integrated database retrieval system
