Ctenopharyngodon idella (grass carp): 127523929
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Entry
127523929 CDS
T08802
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127523929
Enzymes [BR:
cide01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
127523929
2.7.7.52 RNA uridylyltransferase
127523929
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
127523929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
RRM_1
RRM_PARP14_3
zf-met
TUTase
RL
Nup35_RRM_2
RRM_3
Ashwin
zf-C2H2_jaz
zf-C2H2_2
RRM_5
DUF7066
XOO_2897-deam
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
127523929
NCBI-ProteinID:
XP_051771088
LinkDB
All DBs
Position
12:7098513..7106122
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AA seq
801 aa
AA seq
DB search
MELDKDIQTTQRGFHCSLCNVNIPNRPSLEDHVKGKKHQHLQRLRDQRKAQEENSVFVSG
FKPDTSQTDLKEYFAQFGPVSDVIMDKDKGVYAIVEFSEPQNAQTVLAQLQHQFNGLQLR
VKPRERKEFKLASRGKPKHTQISLDKLNYELCKATSVNEQMQKVVENFELGDNEKKVRDL
LVQLLQEVFTEFFPDCKIVPFGSSVNTFGIHSCDLDLFLDLENTKAFQARAKSSGSTGEN
QSEDCHSEDSILSDIDLSTATPTEILELVATILRKCVPGVHKVQTLGTARLPVVKFSHRE
LNLQGDITINNRLAVRNTRFLQLCSGIDSRLRPLVYTIRLWAKQKQLAGNLSGPGPLLNN
YALTLLVIFYLQNRDPLVLPSVNQLKNMACEEEECVIEEWDCTFPSQPFSVPPSKNTEDL
STLLFGFFTFYSKFDFPASVVSLRDGHVLPITDFLRSDEKAVNAAETSSPKQKCSSSPKL
GPMNVLDPFEQNHNVAGNLNERTQKNFKRECCEAEKYCRSLQYQRKSAKGKSWGLVRLFA
TPSEAGPRSKVETEKVMEVSIPFKAAVLPEHLRAQLALAGKEFRGLWFAKVCSAVQIVFE
EILKCSPLEDTQTADLCQSQDKAERDGSEMEVNNNQSLEDTGPQAKSEAGKKRPLITEEG
PSTSTVTLAKRPRLDEDVEHPEPVHWTWTQRNCVWAGRRKVRRDLLKTSDETSKPEGGCV
DIESRVTRSIVEKGEKLQDLLEFKVDAEVVGGNESTKVVLCFHPSHDTAGVFQDFFHFLE
SFLPKMAETILGRAEDVTEMS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgataaagacatccagacaacgcagagaggatttcactgcagcctctgcaat
gttaatatacccaacaggccgagcctggaagatcatgtcaaaggaaagaagcaccagcat
ctccagcggctcagagatcagcgtaaagctcaggaggaaaacagcgtgtttgtgagcggc
tttaaaccagacacctctcaaaccgatctgaaggagtatttcgcacagtttgggccggtg
tcagatgtgatcatggacaaggacaagggtgtgtacgctatagttgagttctccgagcca
cagaacgctcagacagttctggcacagctacaacatcagttcaatggactccagctccgt
gtcaaacccagagagaggaaagagttcaaactggccagcagggggaaacccaaacacacc
cagatcagcctggacaaactcaactacgagctctgcaaggctacatctgtaaatgagcag
atgcagaaggtggtggagaattttgagctgggagacaatgagaagaaagtgagagatctc
ctagttcagctgctacaggaagtcttcacagagttctttccagattgcaaaattgtgccc
tttggctcctctgtgaacacatttgggattcactcctgtgatcttgatctgttcctcgac
cttgagaacaccaaagcgtttcaagctcgtgcaaaatcttctggatcgacaggagaaaat
cagtctgaggattgccattctgaagactccattttgtccgacattgacctgtccactgcc
actcctactgaaattttggagcttgttgcaaccattttgaggaagtgcgttccaggtgtg
cacaaagtacagacgctcggcactgcccgacttcctgtggtcaagttcagtcatcgagag
ctcaacctccaaggagacatcacaatcaacaatagattggcagtaagaaacactcgattt
ctgcagttgtgttcaggcatcgattccagactgcgacccttagtctacaccatccgatta
tgggctaagcagaaacaattagcagggaacctgtctggccctggaccgttgttgaacaat
tacgctcttacactcctggtgatcttctaccttcagaatcgagaccctcttgtgcttccg
tctgtgaaccagctcaagaacatggcctgtgaggaagaagagtgcgttattgaggaatgg
gattgtacatttcctagtcagccctttagtgtaccacccagcaaaaacactgaagatctc
agcactttgctttttgggttcttcaccttttactcaaagtttgatttccctgcatcagtg
gtgtctctgcgagacggccatgtgctgcctattacagacttcctccgaagtgacgagaaa
gctgtaaacgctgcagagacctctagtcccaaacagaagtgttcctcttcccctaaactg
ggccctatgaatgtcctggatccatttgagcaaaaccacaatgtggccgggaaccttaac
gaacgaacacaaaagaacttcaagagagaatgctgcgaggctgagaagtactgccgcagt
ttgcagtaccagcgcaaatcagccaagggcaaatcctggggtctcgtgcggctctttgca
acgccaagtgaagcaggaccccgttcaaaggtcgagactgagaaggttatggaggtcagc
atccctttcaaggcagccgttctcccagaacacttgcgtgcccaactggcattggctggg
aaggaatttaggggtctttggtttgcaaaggtctgctctgctgtgcagattgtgtttgaa
gaaattttaaaatgttcacccttagaggacactcaaactgcagacctttgtcaaagtcag
gacaaagcagagagagatggaagtgaaatggaggtgaataataaccagagtctagaagat
actggtcctcaagccaaaagtgaagctggtaagaagaggcctcttataacggaggagggt
ccatcaacctccactgttacactagctaaaagaccgagactagatgaagatgtggagcac
ccagagccggtccactggacttggactcaaaggaactgcgtttgggcaggccgacggaaa
gtgcggagagatctcttaaagactagtgatgagacttccaaacctgaaggaggctgcgtt
gacatcgaaagcagggtgactcggagcattgtggagaaaggggagaaacttcaagatttg
ttggagttcaaagtggatgcagaagttgtcggcgggaatgaaagcaccaaggttgtcctc
tgttttcaccccagccatgatactgcaggcgtctttcaagacttcttccatttcctagag
tccttcctgcctaagatggcagaaacgatcctagggagggcagaggatgttacagaaatg
tcataa
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