Ctenopharyngodon idella (grass carp): 127523955
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Entry
127523955 CDS
T08802
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127523955
04121 Ubiquitin system [BR:
cide04121
]
127523955
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127523955
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127523955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
DUF659
Motif
Other DBs
NCBI-GeneID:
127523955
NCBI-ProteinID:
XP_051771149
LinkDB
All DBs
Position
12:complement(10452120..10464284)
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AA seq
380 aa
AA seq
DB search
MVPTIYPPSKRVKSEFWKYFGFQKNAEGLLVEDSFPLCKTCGWKVAVKHGYSSNMFAHLR
DNHPVQFREIKSTHASSSAGSSSAEAILQPTVKEAFQHQASYGPSSHRAKEINHAIAYYI
AKDMIPIHTVGKPGFQKLMKTTVPLYKSPSEKFFSKTELPRMYNSLKEEVGKHIAQGKWY
AATTDLWTSSGGSGHPYISFTIHYLLDWKLQTNCLETQFFPEDHTADNIREFFDNMLQEW
GINKERLVSVTTDNATNMKKAFESDTTFPCQWFGCFGHNLNLAISKALKNQRVDTAIRAC
RHLVQVFSRSWKRRRELRNKQEALNIPQRSLIHDVVTQWGSTQKMLQRFIEQQQAVCAVL
ATERGAWHLVPKDADIAVIK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtgccaacgatttatcccccttctaaaagggtgaagtcagagttttggaaatatttt
gggttccaaaaaaatgcagagggattgctggttgaagacagtttccctttgtgtaagaca
tgtggatggaaagtggcagtgaaacacgggtactcgtctaacatgttcgctcatctccgt
gacaaccatccagtccaattcagagagataaagagtacccatgcatctagcagtgctggt
tcatcttcagctgaagccattcttcagccaacagtcaaagaggcattccagcatcaggct
tcatatggaccttcatctcaccgggccaaagagatcaatcatgccatagcatattatatt
gctaaggacatgataccaattcacactgtaggaaaaccaggatttcagaaactgatgaag
accacagttccactttacaaaagtccctcagagaagtttttctcaaaaacagaattaccc
agaatgtataacagtctaaaagaggaagttggcaagcatatagcccagggaaaatggtat
gcggcaaccactgacctgtggaccagcagtggaggaagcggacatccatacatcagcttc
accatccactacctcttagactggaaacttcaaacaaattgcctggaaacacagttcttt
ccagaagaccacactgctgacaatatcagagaattttttgataacatgttgcaagagtgg
ggcatcaacaaagagcgtcttgtcagtgttacaaccgataatgctacaaacatgaaaaag
gcctttgagagtgacaccaccttcccctgccagtggtttggatgttttggccacaacttg
aatctagccatttctaaagctctgaaaaatcagagggtggacacagcaatccgagcttgt
cgacatttggtgcaggtattttcaagaagctggaagagaagaagagagctcagaaataaa
caagaggccttaaacatccctcagaggtcgcttatccatgatgtagtcactcaatgggga
tcaactcagaaaatgctgcagaggtttattgaacaacagcaggcagtctgtgctgtactg
gcaactgagagaggggcatggcatttggtgccaaaggatgcagatattgcagttattaag
taa
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