Ctenopharyngodon idella (grass carp): 127524092
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Entry
127524092 CDS
T08802
Name
(RefSeq) LIM domain-binding protein 3b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127524092
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127524092
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
127524092
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
127524092
NCBI-ProteinID:
XP_051771407
LinkDB
All DBs
Position
12:complement(17724170..17747083)
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AA seq
308 aa
AA seq
DB search
MSNYTVTLSGPAPWGFRLQGGKDFNMPLTISRITPGSKAASGNLNQGDIITAIDGVSTEG
MTHLDAQNKIKAATTKLVLTMQRSRRPAPVPTATPRMDSPMPVIPHQKETMDTEEGEDDE
KPVKKYGILLAKKPSKKSLIPNTEKQPQENVIHSPAKSPVPSNLSFGQGAKNTPNQRGQY
NSPIGLYSAETLREMVMQQDSLNGLPLLGSLPIKDPLVDSASPVYQAVIKPDDKEPEMSE
WARRAANLQSKSFRILAHITGTEYLQDPDEEALRKSREKFESEVKGPRFAKLKNWHHGLS
AQILNIQG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattacacagtaaccctgtcaggacctgcaccatggggcttcaggctgcaggga
ggcaaagacttcaacatgcccctgaccatctcccggatcacaccaggcagcaaggcagca
agcggaaacctcaatcagggtgacatcattacagcaatagatggggttagcactgaaggc
atgacccatctggatgcccaaaacaagataaaggcagccaccaccaaactcgtcctcact
atgcagaggtcgagacgtcccgctcctgtacccacagctactccaagaatggactcaccc
atgccagttatccctcaccagaaggaaaccatggacactgaggaaggagaagatgatgag
aaacctgtcaaaaaatatggcatcctcttggccaaaaaaccttccaaaaagtctcttatt
ccaaacactgagaagcaacctcaagagaatgtaattcattctcctgctaaaagccctgtc
ccttctaatttgtcattcggccaaggggcaaaaaataccccaaaccagaggggacagtat
aattctcccataggcctgtattcagcagaaactttaagggaaatggtcatgcaacaagac
agtctaaatggcctgccattgttgggctcacttcctattaaagaccctcttgtggatagt
gcttctccagtgtaccaggccgtaatcaaacctgacgataaggagccggagatgtctgaa
tgggcccgtcgcgctgccaacctgcagtccaagtccttccgcatcctggctcatatcaca
ggaacggagtatttgcaagatccagatgaagaggctcttagaaaatcaagggagaaattt
gaatcagaggtaaaaggcccacgatttgccaaactgaaaaactggcaccacggcctatct
gcacagatccttaacatccaggggtaa
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