Ctenopharyngodon idella (grass carp): 127524172
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Entry
127524172 CDS
T08802
Name
(RefSeq) homeobox protein SIX3-like
KO
K19473
homeobox protein SIX3/6
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127524172
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
127524172
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
127524172
NCBI-ProteinID:
XP_051771536
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Position
12:29497009..29499755
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AA seq
293 aa
AA seq
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MVFRSPLELYPSHLFLPNFADRPLLLAGSIPRARSPEDLPMFQLPTLNFSAEQVASVCET
LEETGDIERLGRFLWSLPVAPGACDAINKHESIQRARAVVAYHTGSFRELYHILENHKFT
KDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTR
GLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHHGLGQS
GLRSMSESGCTPHSSAESPCAAASPTTSVSSMNERGDGGTILSVTDSDSDFDV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcaggtctcctttagagctttatccctcacatcttttcctgcccaatttcgcg
gatcgccctctgcttctagcgggcagcattcccagagcgaggtccccggaggacttaccg
atgtttcaactgcccaccctaaacttctcggcggaacaggtggccagcgtgtgcgagacg
ctggaggaaaccggggacatcgagagactcggacgtttcctttggtccttgcccgtggca
cccggagcctgcgatgccatcaacaagcacgagtccatccagcgagcccgagcggtggtc
gcgtatcacactggaagcttccgcgaattgtaccacatcctggaaaaccacaagttcacc
aaagactctcatggaaagctgcaagcgatgtggctcgaggcacactaccaagaggcagag
aagctgcgcggtcgtcccctcggacccgttgataaataccgggtccgcaagaagttcccc
ttgccacggaccatctgggatggtgaacagaagacgcactgtttcaaggaacggactcgc
ggcttgttgagggagtggtacctacaggatccttaccccaatccgagcaagaaaagggaa
ctggcacaagccactggactgactcccactcaagtgggcaattggtttaaaaatcggagg
caaagagacagggcggcagctgccaaaaacaggcttcaacatcacggactgggtcaaagc
ggcctgcgctccatgtcagagtccgggtgcacaccgcacagctcggccgaatccccgtgc
gcggccgccagtcccactaccagcgtctccagtatgaatgaacgaggcgacggcgggacc
atcctctcagttacagacagtgactctgatttcgatgtatga
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