Ctenopharyngodon idella (grass carp): 127524176
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Entry
127524176 CDS
T08802
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127524176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127524176
03012 Translation factors [BR:
cide03012
]
127524176
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127524176
Translation factors [BR:
cide03012
]
Eukaryotic type
Release factors
127524176
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
127524176
NCBI-ProteinID:
XP_051771541
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Position
12:complement(14119787..14130078)
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AA seq
564 aa
AA seq
DB search
MDSRDIAPDSWEQEDDVEATADTELQSAFTGLNVNAPEFVPSFLSRGPPENDTSDGTDAV
ASMEISEPVAAVENGETDASAVETWEQKGELDEEEPGGGSPADTGCCGDEEQDEMMEEDE
EMPTPKLPPPLPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKESSELCPWYTGLPFISHLDSLPNFT
RSTDGPIRLAIVDKYKDMGTVVLGKLESGCIGKAQQLIMMPNRHTVEVLSLLSDDVETDY
AGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacatagcccctgattcgtgggaacaggaggacgatgttgaggccacg
gctgataccgaacttcagtccgccttcaccgggctcaacgttaacgctccggaattcgta
ccatcctttctttctcggggtccaccggaaaacgatacgtctgatggcactgatgcagtg
gcgagcatggagatctcagaaccagtggctgcagtggagaatggagagacagatgccagc
gcagtggagacgtgggagcagaagggagagctggatgaggaggaaccaggaggtggatcc
ccagctgatactggatgctgtggggatgaggaacaggatgaaatgatggaggaggatgaa
gagatgccgacccccaagctgcctcctcctctaccagatgcccctaagaaggaacatgtg
aatgttgtgttcattggacatgtggatgcaggcaagtctacaattggtggacagattatg
tatctaactggtatggtggacaaaagaacgttggagaaatatgaacgggaggcaaaagag
aagaacagagagacttggtatctttcctgggctctagatacaaaccaagaggaaagagac
aaggggaaaacagtagaagttggaagagcctactttgaaactgagaaaaagcactttact
attcttgatgccccgggccataaaagctttgtacccaacatgattgggggggcatcccaa
gctgacttggcagtgctggtcatctctgccagaaagggtgagtttgagaccggttttgaa
aagggaggtcaaacgagggagcatgccatgctggccaaaacagctggagtcaaacatctg
atagtcctcatcaataaaatggacgatcccactgtgaactggagtttggatagatatgag
gaatgtaaagagaagttagtgccatttctgaagaaagtaggctttaatccaaagaaagac
attcacttcatgccgtgctccggactgacaggagccaacttgaaagaatcttctgagttg
tgcccctggtacacgggattgccgtttatttcacatctggacagcctgccaaacttcacc
agatcaactgatggtcccatcagattggctattgtggataaatacaaggacatgggcacc
gtggtgcttggaaaactggagtctggatgtatcggaaaagcacaacagcttattatgatg
ccaaataggcacacggtggaggtgttgagtcttctctctgatgatgtggagacggattac
gccgggcctggtgaaaacctgaagctccggctcaaaggcattgaggaggaagagattctc
ccaggttttatcctatgcaatgctgagaacctctgccactcagggcgcacttttgatgcc
cagattgtcattattgaacacaaatccattatatgcccaggttacaatgcagtactacac
atccatacctgcatagaagaagtgcagataacagcattaatctgtctggtggacaagaag
acaggagaaaagagcaagactcgcccacgcttcgtcaaacaagaccaagtatgcatcgcc
cgtcttagggctgcaggaactatctgcttagagacttttaaagacttccctcagatggga
cgtttcaccttgagagatgagggtaagacaatcgcaattggcaaggtgctgaagttggta
cctgagaaggactaa
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