Ctenopharyngodon idella (grass carp): 127524332
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Entry
127524332 CDS
T08802
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127524332
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Other domain-containing proteins
FERM domain-containing proteins
127524332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
FERM_f0
PDZ_2
MAGUK_N_PEST
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
127524332
NCBI-ProteinID:
XP_051771745
LinkDB
All DBs
Position
1:complement(19937358..19979996)
Genome browser
AA seq
1764 aa
AA seq
DB search
MEERDRSRSPSRRTSRVEQVVGRWLRRSRESISRERVLEDGQVTDNGSQEQRSCPIRVTV
KIPLDPTLNSHGFTVSTHSPPQVLDVTEGGPADGKLVPGDQLFKINNVAVDDLSTEQAAD
IIRECQNTIILTVLRNTVGPKSSFITPEKRAKLKSNPVKVRFAEEVVVNGHSQGNSLLFL
PNVLKVYLENGQTKAFKFESKTTVKDIVMTLKEKLSITRIEHFSLVLEQQYSISKLYLLH
EEEIIQKVVEKKETHDYRCLFRVCFLPRDFKSMLREDPVAFEYLYLQSVSDVLQERFAVE
MKCNTALRLAALHVQEKLANSGQSLKTPLKAIMKEWGIESFVSHTLLRNMREKDLKKAIS
YHMKKILSQEPKQKVVSVNNARLNYLNEMSELKSYGGKAFSATMMLQDRESMVSLLVGAQ
YGVSQVINHKLSIMTTLTEFSCITRVELLPESDRVSLVKIYLQDIKPITLLMESVAAKDL
LCLVSGYCKLLVDPQICVFPWSTNSKSHRISAEEGYVSHCGSDSDDSDTDVDALLAHVAS
TAESNKTAVKPSDKLPEETEKTQSNNEKDVEVEKEGGKEEEVVEKKEKEEDKETIHESIH
GNNGKTVETDNERVGTEKEDKEQEKKPEQPQCVIIVDDPSSEASDSYQTESHFMTSMSSD
SIDALEEDDLMSYFSTRRPCHLPVNDSYCCEDRYSPALSPQQQHSKDSHSQSDMYSADSH
CEPDIDQFFCFAALSNIAECLPSPPAASEEEDCEELGPENEKHEKGSPAKCPESTLPPPG
DYVFTFEQGDTRHYYNICSNVTPDSARSLPQPLSPPGPIETQPDREGGEVNQTETVPIFQ
PPPGFGDSSSDDEFFDAQERFTSPEEPYSNAMTRENSSTILHTVSLGEIGICVREREAED
LQKKRKEEGKVIAQDEFSNFNKRSKKRRSFMETNYTSLVSFPEHDQLDNSYGNSIPSYGS
ISVNHGAGRMACFDGGCSDQGPCPTVSSLTDSEGEPAQLESKPISPSKVNGSGPHNTTDT
QVEHSNKAYQRKQQLIEMEPDSMEFKSVSELMSSVSPTIVAVRSRMDLQDKGSTSNHGRD
DQEEGAVGGLVERLFGGHLFFDTSEGKCDSSILFAQRDDHVAKLEDSFQGRSVPQKSSSL
PRLGQLSPSSLPYFHVPSISYTTSPNIDKDDDTVYLESGMGKCSVDPTERTRSQSMSASF
GSGAPHCPTRHLFSQRVVGPESDETNNSCDSSIQELSSGVPSYEPAQRFLLTPCSSGILG
RLSASTLRGKIQNLPLYLSRSQEMLTANSNGSGNVKPVRRLSETQLQRNEVEVAKEVTED
VTLNEGSPEITEVKVVTIVSEEVTEVIEEVRKVSHISPQACGQHKTKTEPKEFSVIAISS
LCSKPDNSLQANPSSVVVTTQNLNGPWGVVTSSGLQECSFPPSSTTPQNFTSSCGVFTNC
QSKPTIAQPQSLPSPNQHKKQDLSCSSVLAMGCDTVMESAQTPLEVCQTVYTNCFSGVLD
SASFDDELTVYEFSRRTSQGETGDTVLTSVPPSSLSASPASFSPSSPLPSFPHLVLPASS
STELSPLLSPLDAPDCFLTDPREDIMTSLLTRRYPLPPTGFLSLQRDVDTLLSVLAGAIK
NQDGAHEHPRDTCVTHFSDNKKRLHAEARGLLAGCQRVVRVGQTPEETLQSLSESFRSLV
QLTVVCLCFSSCQRCRERHAQALTGLANVAKTYQDFARAAELVGNATKRKTCHDLSIKLL
ARQCTALTTSVFCLTQLFRTLTAL
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagggaccgcagtcgctcaccatctcgcaggaccagcagagtagagcaggtg
gtgggacgctggcttcgccgttccagggagtccatcagccgagaacgtgtgctagaagat
gggcaagttactgacaatggttcccaggagcagaggagctgtccaattagagtcactgtt
aagatcccacttgaccccacccttaactctcatggctttactgtctcaacacactctccg
ccccaggtgttggacgtgacagaaggaggccctgctgatggaaagcttgtccctggtgac
cagcttttcaaaataaacaatgttgctgttgatgatctatcaactgagcaggctgctgac
atcatcagagaatgtcagaacaccataatattgactgtcctgagaaatactgtggggcca
aagtcgtcattcataactccagagaagagagccaagctgaagtcaaaccctgttaaagtg
aggtttgcagaggaggtggtggtcaatggtcactcgcagggtaactctctgctgttcctg
cccaatgttctgaaggtctatctggagaatgggcaaacgaaggcttttaaatttgaatct
aaaaccactgttaaggacatagtgatgactctgaaggagaaactctcaatcacccggatc
gaacacttctcccttgtacttgaacaacaatacagcatcagcaaactatatctactacac
gaggaagagattattcaaaaggtggttgaaaagaaggagactcatgactacaggtgtctg
tttcgtgtctgttttctaccgagagactttaagagcatgcttagagaagatcctgtggcc
tttgagtatctatacttacagagcgtgagtgatgtattgcaggaaaggtttgcagtggag
atgaaatgtaatacagctctcagactggctgctctacatgtacaggaaaaactagccaac
agtggacaatcacttaaaacacctctgaaggccattatgaaggagtggggtattgaaagc
tttgtgtcccacaccttactgcgaaacatgagagagaaggacttgaagaaagctatcagt
taccacatgaaaaagattctatctcaggagccaaagcaaaaggtggtctcagtgaataat
gctagactgaactacttgaatgagatgtctgaactgaagtcctatggaggaaaggctttt
agtgccactatgatgctgcaggacagggagtcaatggtgagtttgttggtgggagctcag
tatggggtgagtcaggtgatcaaccataaactgagcatcatgaccacactaactgaattc
agctgcattaccagagtggaactattacccgaatctgacagagttagtctggtcaagatc
tacctgcaggatataaagccaataacattgctgatggagtcagtggcagctaaagattta
ttgtgtctggtttctggatactgcaaactacttgtggacccccagatctgcgtgttcccc
tggtcaactaattcaaagagccaccgcatatcagcagaggaaggttatgtgtcacactgt
ggcagtgactctgatgactcagacacagatgtggatgctctccttgctcatgttgctagc
actgccgaaagcaacaaaacagcagttaaacccagtgataagctacctgaagaaactgaa
aaaacacaaagtaataatgaaaaagatgtagaggtggaaaaggaaggaggcaaagaagag
gaggtggttgagaagaaggaaaaggaagaggacaaagaaaccatccatgaatctatacat
ggtaataatggaaagacagtagaaacagataatgagagagtgggcacagaaaaggaagac
aaagagcaagagaaaaaacctgaacaacctcagtgtgtcatcattgtggatgacccttca
tctgaagcatctgattcataccaaactgaatcacatttcatgaccagcatgtccagtgac
tctatagatgccctagaggaggacgacctgatgagctacttctctaccagacgcccatgc
catttaccagtgaacgactcttactgctgtgaagaccgctattcaccagcattatctcca
cagcaacagcacagcaaagattcccattcccaaagtgacatgtactctgctgattcccat
tgtgagcctgatattgaccaattcttttgctttgctgcactctcaaatattgctgaatgt
ctacctagcccccctgcagccagtgaagaggaggactgtgaggagttgggaccagagaat
gaaaaacatgaaaaggggtcacctgcaaaatgtcctgaaagcaccctaccccctcctgga
gactatgtgttcacctttgaacaaggagacactagacactactacaatatctgctccaat
gttacccctgacagtgcccgcagccttccacaacctctctctcctccaggtcctatagaa
acacaaccggatcgggaaggaggggaagtgaatcagacagaaacagtgccaatttttcaa
cctccaccagggtttggagacagcagttcagatgatgagttctttgatgctcaggaaaga
ttcacatcccctgaagaaccctactcaaatgcgatgacaagagaaaattcaagcaccata
ttacacacagtaagcctgggcgagattggcatctgtgtcagggaacgagaagcagaggat
ctacagaagaaacgaaaagaggaaggaaaagttattgcacaagatgaattttcaaatttt
aataaaagatccaaaaagcgtcgctcatttatggaaacaaattacacatccctggtatca
ttcccagaacatgatcaattagataacagctatggaaatagcatcccaagctatgggtct
atatcagtcaaccatggtgctggccgaatggcatgttttgatggtggatgctcagatcaa
ggtccatgtccaacagtctcatctctaaccgattctgaaggagaaccagcacaactggaa
tccaaacccattagcccatccaaagtcaacggatcaggaccacataataccactgataca
caagtggaacactcaaacaaagcatatcagcggaaacagcaacttatagagatggaacca
gattccatggagttcaaatcagtctctgagctaatgtcttctgtatcgccaactatagta
gcagtacgctcccgcatggacctacaggataaaggtagcaccagtaatcatggtagagat
gatcaggaggagggtgcagtgggaggtcttgttgagagactgtttggaggccacttgttc
tttgatacatctgaaggaaagtgtgatagcagtattttatttgctcaaagagatgaccat
gtagccaaactggaggattcattccagggcagatcagtgccccagaagagcagctcactg
ccaagactaggccagttatccccatcaagtttaccctacttccatgtcccgagtatatca
tacactacaagtcctaatatagacaaggatgacgataccgtatatctagaatctgggatg
ggaaaatgctcagtggaccccacagagaggacaagaagtcagagcatgtctgcatccttt
ggcagtggtgcaccacattgcccaacaagacacttattttcccagcgagtcgttggacca
gaatctgatgaaactaacaattcttgtgactcttccatccaagaactgtcttctggcgtt
ccttcttatgaaccagcccaaaggttccttcttacaccctgttcatctggcatccttggt
cggctctctgcctcaacattgcggggaaagatccagaaccttcctctctacttatcacgt
tcccaggaaatgctaactgccaattctaatggcagtggcaatgttaagcctgtgagaaga
ctttcagaaacacaactacaaagaaatgaagttgaggtagcaaaagaggtaactgaggac
gtgaccttgaatgaaggttctcctgaaataacagaggtaaaagtggttaccatagtatct
gaagaagtaactgaggtcattgaagaggtaagaaaggtcagccacattagtcctcaagca
tgtggtcagcataaaaccaaaactgaacctaaagagttttctgtaatagccatatcctcc
ttgtgttccaagccagacaactctctccaagccaacccctcatctgtagtggttactaca
caaaacctaaatggaccctggggggtggtaacgtctagtggattacaagaatgtagcttc
cctccctcaagcacaactccccaaaactttacctctagctgtggggttttcacaaactgc
cagtccaaacctaccatagcccagccacaatccttgcccagcccaaatcaacataagaaa
caagaccttagttgcagctcagtactggctatgggttgtgacactgtaatggagagtgct
cagacacctttagaggtctgccagacagtatacaccaactgtttcagtggagttcttgac
agtgccagctttgatgatgaactcactgtctacgagttttcccgcagaacgagccagggt
gaaacaggggatacagtgctgacatctgtccctccttcctccctctctgcatcccctgca
tctttctctccatcttctccattgccctcattccctcatctagtactgcctgcttcttca
tctacagagctcagtccccttctgtctcccttggatgcccctgactgcttcctaacagac
cctcgtgaagatatcatgacttcactgctgactcgccggtatcccctaccaccaacagga
ttcctttctttgcaaagggatgtggatacactcttaagtgttcttgctggtgctataaag
aaccaagatggggcccacgagcaccccagggatacctgtgtgactcacttttcagacaac
aaaaagcgattacatgcagaggctcgggggcttttagctggatgtcagcgtgtggtcagg
gttgggcagacgccagaggaaacacttcaatcattgtctgaaagcttccgctcactggta
cagctgacagttgtgtgcttatgtttctctagttgccagcgatgcagggagcgccatgcc
caagcacttacaggactagcaaatgttgcaaaaacttaccaagactttgctcgggcggca
gagcttgtaggaaatgctactaaaaggaagacttgtcatgatctgagtattaaactcttg
gctcgccaatgcactgcactaacaacttcagtgttttgcctcacccagctctttcgcact
ctcactgccctttga
DBGET
integrated database retrieval system
