Ctenopharyngodon idella (grass carp): 127524367
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Entry
127524367 CDS
T08802
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127524367
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127524367
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127524367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_PNO1_2nd
SNF2-rel_dom
KH_2
CMS1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
127524367
NCBI-ProteinID:
XP_051771738
LinkDB
All DBs
Position
13:complement(10820330..10831940)
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AA seq
692 aa
AA seq
DB search
MSDWEDEYDADGVAISKPLPVKNAPVQSWRPPSLRGARSREATSVGAKFGNVREGEQWTN
RRDRDVESNICDGEVGKNNSYSRSRAGPTGCRSSGDRSGSSPETLNVENSLVGRIIGRGG
AKIRELEESSGASIKINRGAHDAEVLIFGSCDAQLKAKDMIEDLVHGNSVRGPGYRNGNS
NAEYQSDSCWPASAVRAVAAAAPTPLPIDWTALRENRDKYEAIKWQDLPTLKKDFYIEAK
SVAARSAEEVKIWRKENNNIFVDDLKDEDKRTIPNPVCTFEEAFAHYPGIMENIVRVGFQ
KPTPIQSQAWPIILKGIDLIGIAQTGTGKTLAYLLPGFIHMDQQPVPRDRRDGPGMLVLT
PTRELALQIEAECNKYSYKGFKTICIYGGGDRKAQIKVVTSGVDIVIATPGRLNDLQMNE
LINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPDRQTVMTSATWPTGVRRLAKSYLK
DPMMVYVGTLDLAAVNTVHQTVLFVQEEEKKDYVFDFIHRMEPQDKVLIFVGKKIKADDL
SSDLCLQGVAVQSLHGDREQCDREEALQDFRDGRVRILVATDLASRGLDVHDITHVFNYD
FPRNVEEYVHRVGRTGRAGRSGASVTLVTREDWKVASELITILERSGQDVPEELVLMAER
YEKHQREKEMFASRGRGGGQRGRFRGGSDRRF
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactgggaagatgaatacgatgcggatggtgtggcgatttcaaagccgttaccc
gttaaaaacgccccggtacagtcatggaggcctccctctttgagaggcgcgcgaagccga
gaagccacgagtgttggcgcaaagtttggtaatgtaagagagggcgagcaatggacaaac
cggagggaccgagacgttgaatcaaatatttgtgacggtgaagttggtaaaaacaatagt
tacagtcgttccagggctggacctacaggatgtcgtagtagtggagacagatcaggttca
tcaccggaaactctaaatgtggagaactctttggtggggaggataataggtcgaggtggt
gcgaaaattcgggagctcgaagagagcagtggagcatcgataaagataaaccgtggtgcg
catgatgctgaggtgcttatctttggaagctgtgatgctcagctcaaagccaaagacatg
attgaagatctggtgcatgggaactctgtcagaggtcctggataccgcaatggaaatagc
aatgcagaatatcagagtgactcatgctggccagcttctgctgtacgagctgtggccgca
gctgctccaacacctttacctattgactggactgcacttagagaaaaccgtgacaaatat
gaagctattaaatggcaagatcttcccactctaaagaaggatttctatattgaagcaaaa
tcagtggctgcccgtagtgcagaagaagtcaaaatctggagaaaagagaacaacaacatc
tttgtggatgatctgaaagacgaggataaaagaaccattcccaatccagtgtgcactttt
gaggaggcttttgctcactatcctggaataatggaaaacattgtccgagtgggatttcaa
aagccaactcccattcagtcacaagcctggccaattatcctgaaaggaatagacctcatt
ggaatagcccagacaggaacaggcaaaactttggcctacctgcttcctggctttattcat
atggatcagcaacctgtgcccagggacaggagagatggccccggcatgttggttttgact
cccactcgtgagctggccctccagattgaagccgagtgcaacaaatacagctacaaagga
tttaaaaccatctgtatctatggaggtggtgaccgaaaggcccagattaaagtagtgacc
agtggtgtggacatagtcattgccacaccaggacgattaaacgatctgcagatgaatgag
ctcatcaacttgcgctccatcacctatctggtgttggatgaggctgatagaatgttggat
atgggctttgaacctcaaatcatgaaaatcattctggatattcgacctgacagacaaact
gtaatgactagtgccacctggccaacaggtgtcaggcggctggccaaatcctacctgaaa
gaccccatgatggtttatgtgggaaccttagatctagcagcggtgaacactgttcatcag
acagtgctgttcgttcaggaggaagaaaaaaaagactatgtttttgacttcatccaccga
atggagcctcaagacaaagtactaatattcgttgggaaaaaaataaaagccgatgacctg
tccagtgacctgtgtctgcagggtgtagcggttcagtctctgcatggagacagagagcaa
tgcgacagagaagaggcactgcaggactttagagatggtcgtgtgcggattctggtggcg
accgacctggcctcccgggggctagatgttcatgacatcacgcatgttttcaactatgac
ttccctcggaatgtggaggagtatgtgcaccgtgttgggagaactggtcgagcagggagg
tccggtgcctctgtaaccctggtaacaagagaagactggaaagtagcttctgagttgatc
accatcctggagagatctggtcaggatgtaccagaagaactggtgctgatggctgaacgt
tatgaaaaacaccagagggagaaagaaatgtttgcgtccagaggcagaggaggaggacag
agaggtcgtttcagaggaggctcagaccggaggttctga
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integrated database retrieval system
