Ctenopharyngodon idella (grass carp): 127524502
Help
Entry
127524502 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: girdin
KO
K25392
girdin
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cide03037
]
127524502
Cilium and associated proteins [BR:
cide03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127524502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
KASH_CCD
GAS
DUF4472
APG6_N
Motif
Other DBs
NCBI-GeneID:
127524502
NCBI-ProteinID:
XP_051771994
LinkDB
All DBs
Position
13:complement(29611476..29662611)
Genome browser
AA seq
1788 aa
AA seq
DB search
MDEVFTPLLEDFLQSPLVCWVKTVSQLISDGSHLSDFMTLVDGVYLNDIMIQINPQSSVQ
RPHRKVNNDPTLRIQNLSILVQQIKSYYQETLQQLVVMSLPDVLVLGRTPLSEQGLEEMR
KLLLLLLGCAVQCNRKEEYIDRIQTLDYDTQAAIAGHIQEVTHNQENVFDLQCVEESESV
SHDKDTLVRDLTFNLKRLVDERDQHAETIVSLTLERDCGHASPXRSTPPLSPSESPSMRR
TESVQHLSVELADAKAKIRRLRQELEEKTEQLLDCRQELDNMEAEVKRLQQENLQLMCDA
RSLRAYRDELDAFREKAVRVDKLESEMMRYKEKLHDIEFYRTRVEELKEDNQVLLETKSM
LEDQLESFRARSDKHHELEKENLQLKNKIHDMEMDRDMDRKRMEELMEENLSLEMAQKQS
MDESLHLGWELEQLSKTTPELTEVPQKSLGHEVNDLTSSQLLKLEKENQMLLKTVEELKA
SSESGARLRLEKDKQKLSQQLEQLQTELTADRESLRSAESLSADLLKEKAQLEKTLETLQ
ENSDRQVKGLEQENEHLNQTIASLRQRSQVSAEARVKDIEKENRVLHESIKETSSKLNKM
EFERKQLRKDLEHYKDKGERAEELEMEVHRLEREKESLQKRLAALAITCEKVEVLEKENA
ELEAESRRHKKAADGLRNVSYQLEVLEKESAQLDEENLELRRMVESLRSTGAKAAQLELE
NRELENERTQLRKSLELLKASSKKNERLEVSNQSLDAENQRLQKALENGSRKIQKLEGEL
QDMEVENQNLQQSLEELKISSKGLEQLAQENATLEQENTQLERDKKQLEKENKRLRQQAE
IKDSKLDEDNLRISHLEKENRVLGKEVATLKDTCGRMKDLEKDNKELVKQATIDKKTLVT
LREELVNEKLKTQQINNDLEKLTHELEKIGLNKEGLLGDEESSDDRFKLLECKLESTLKS
SLEIKAEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQRQEEECTAQSSPARGRED
TQSISKWEKESQEATRELLKVKDRLIEVERNNATLQAEKQALRTQLKQLESQSSNLQAQI
LALQRQTASLQENNTTLQTQNAKLQVENSTLNSQSAALMSQNAQLQTQQSSTESERDAAM
REKEELRTVYDLLLHDHEKLSALHERQASEYEDLIGKHGELKSGHKSLEVQHRSLENRYN
QLLKQKTELEQLEKELKADREKMISDNKSHQDMAAQYHKLSAEHHTLNSTYQQLLKDNEL
LQTDHKTLKSQLNTARLEQTRLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNLEEE
NRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYKF
YDPSPPRRRGNWITLKMKKLIKPKSRERMRSLTQTPSRSESSEGFLTLPHPDSQDSSSIG
SGSNSLEDSLTHRSGRKRAEKSQTQASSNALKKLPFMRNRSKEKDREKAVYRRSMSMNDL
LQTMAVSEGQWSSSTDHLEAPDGKEFGSMDYSSAAAEYANLSRSRNARHHIDTGNAMSSD
DITQLSSEESSVLRAQGVMNGSASRAHSESSGDISVSLDSPQHSSLDGKRRAKSGGSEMV
SLQQFLIESTDPAEDALAAQSGRASGAAPQASKERGKGRGILRSASGKAPASESSAARAN
QPGRPSLRKAESTRAKGSAPPRAGLSSQSKAVSVSERLDSSSGLPRASSVISTAEGTVRR
TSIHDLLSKDSRQPVLVDPSPSRTKSASNVEVLQENRKSKRGGTQSLS
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtttttacgcctttgttggaggattttctgcagtctcctctggtgtgctgg
gtgaagactgtctctcagctcatctctgatggatctcatctgtcggacttcatgacatta
gtggacggagtttatttgaacgacatcatgattcagattaatccgcagtcgagcgtccag
agaccccacaggaaggtgaacaacgacccgacgctgcgcatccagaacctgtccatcctc
gtgcagcagatcaagagctactatcaggagactctgcagcagctggtggtgatgtcactt
cctgacgtgctggtgttgggcaggactcctctcagtgagcaaggactggaggagatgagg
aaactactgctgctgctgctgggctgcgctgtacagtgcaacaggaaagaggaatacatc
gacaggatccagacgctggactatgacacgcaggcagccattgccggtcacatccaagag
gtgacccataaccaggagaacgtctttgaccttcagtgtgtggaggagagcgagtccgtc
tcgcacgataaagacacgcttgtcagagacctgacctttaacctcaagcgcctcgtagac
gagagagaccaacatgccgagacgattgtgtctctgactctggagcgggactgcggtcac
gcatctcctnngcggtccacgccacccctgtcgcccagcgagtcgcccagcatgagacgc
acggagagcgtgcagcacctgtctgtggagctggccgacgctaaagccaagatcagacgc
ctgcggcaggagctagaggagaagactgaacaactgctggactgcaggcaggagctggac
aacatggaggcagaagtgaagagactgcagcaggaaaacctgcagttgatgtgtgacgcg
cgttcgctgcgggcgtatcgtgacgagctggacgcgttccgagagaaggccgtcagagtg
gacaaactggagagtgaaatgatgcgctacaaagagaaactccacgacattgagttctac
aggaccagagtggaggaactgaaggaggacaatcaggttctgctggagaccaaaagcatg
ctggaggatcagctggagtcattcagagctcgatctgataaacatcatgagctggagaag
gaaaatctgcagcttaaaaacaagatccacgacatggagatggaccgagacatggacagg
aagcgcatggaggaactgatggaggagaacctgtcgctagagatggctcagaaacagagt
atggacgagtctctgcatctgggctgggaactggagcagctctccaaaaccacacctgaa
ctcactgaagtgccgcagaaatctctgggtcacgaggtgaatgacctgacatccagtcag
ctgctcaagctggagaaggagaatcagatgctgctgaagaccgtggaggagctgaaggcg
tcgagtgagagcggcgcgcgcctccgactggagaaagacaaacagaaactcagccagcag
ctggagcagctgcagacggagctgaccgcagacagagagagtctgcgcagtgctgagagt
ctgagcgcagacctgctgaaagagaaagcgcagctggagaaaacactggaaacgctccaa
gagaactccgacagacaggtcaagggtctggaacaggagaacgaacatctgaaccagacc
atcgcctctctcaggcagcgctctcaggttagcgctgaagcccgcgtcaaagacattgag
aaagaaaaccgtgtgctgcacgagtccatcaaagagaccagcagcaaactcaacaagatg
gagtttgagcgcaagcagcttcgcaaagacctggagcactacaaagataaaggagaaaga
gctgaagagttggagatggaggtccatcgactggagcgagaaaaggagagtctgcagaag
cgactcgccgctctcgccatcacctgtgagaaggtggaggtgttggagaaggaaaatgcc
gaactggaagcggagagtagaaggcataagaaagcagcggatggtctgaggaatgtttcc
tatcaactggaggtcctggagaaggaaagcgctcaactggacgaagaaaacctggagctc
aggcgcatggtcgagtctttacggtccacgggagcaaaagcagcccagctggagctggag
aacagagagctggagaatgagagaactcaactcagaaagagccttgagctgctgaaggct
tcgtccaaaaagaatgagcgtctggaagtaagtaaccaaagcctagatgcagagaaccag
cggctccagaaagccctggagaacggcagccgcaagatccagaagctggagggggaactg
caggacatggaggtggagaaccagaacctgcagcagagcctggaggagctgaagatctcc
agcaaaggtctggagcagctggcgcaggagaacgcaaccctggagcaggagaacactcag
ctggagagggacaagaaacagctggagaaggagaacaaacggctgcgacagcaagctgaa
attaaagactctaagctagatgaagacaacctgcgtatctctcatctcgagaaagagaac
cgtgtgctcggcaaggaagtcgccactctcaaagacacgtgtggtcgcatgaaagactta
gaaaaggacaacaaggagctggtcaaacaagcaaccattgacaagaagactttggtcact
ctgagagaggaactagtcaatgaaaaattgaagactcagcagattaacaatgacctggag
aaactgacccatgagcttgagaagatcggtctcaataaagagggtcttctgggtgatgaa
gagagttctgatgacaggtttaagcttctagagtgtaaactggagtccactctgaaatcc
tctctggagatcaaagcggagaagatagctgctctagaagcccgactacaggagtcctcc
aacctcaaccagcagctacggcaggagctcaaaacggtgaagaagaactacgaggcgctg
cgtcagcgtcaggaggaggagtgtacggctcagagctcacctgctagaggacgggaggat
acacagagcatcagtaaatgggagaaggagagtcaagaggccacacgagagcttctgaag
gtcaaggatcgactcatagaggtggagagaaacaatgccactcttcaagcagagaaacag
gctctccggacgcagttaaagcagctggagtctcagagcagtaatcttcaggcgcagata
ttagcgctgcagaggcagaccgcgtccctacaggagaacaacaccacgctgcaaacacag
aacgccaaactacaggtggagaactcgacactgaactctcagagcgctgctctcatgtcc
cagaatgcccagctgcagacgcagcagtccagcacagagagcgagagagatgccgccatg
cgagagaaggaagaactacgcacggtgtacgatctgctgctacacgaccacgagaagctg
tccgccctgcacgagagacaggcatctgagtacgaggatctgatcggcaaacatggagag
ctgaagagcggccataaaagcctggaggtgcagcaccgcagcctggagaacaggtacaat
cagctgttgaagcagaagacagagctggagcagctggagaaggaactcaaagcagatcga
gagaagatgatctctgacaacaagagccatcaggacatggctgcacagtaccacaaactc
agcgccgagcaccacacgctgaattctacataccaacagctcctgaaggacaatgagctt
ctgcagacggatcataagacgcttaagagtcagctgaacacagcccgtctggagcagacc
cgtctagaggccgagttctccaaactcaaggaacagtaccagcagctggacataacctct
accaaactcaccaaccagtgcgagttattaagtcagttgaaagggaatctagaggaagag
aaccggcatttgctggatcagatccagaccctcatgctgcagaaccggaccctgctggag
cagaccatggagagcaaagacctgttccacgtcgagcagcggcaatacattgataaactc
aacgaactgaggagacagaaggagaaacttgaggagaagattatggatcagtataaattt
tatgatccatcacctccacgaaggaggggtaactggatcacactgaagatgaagaaactc
atcaagccaaagagtcgtgagcgcatgcgctctctcacacagaccccgtcccgctcagag
tccagcgaaggtttcctgacgctgccccacccagacagtcaggacagctcatccataggc
tccggatccaattcactggaggattcgctcacccaccgcagcggcaggaagagagctgag
aaaagccaaacgcaggcttcctctaacgccctgaaaaagcttccgttcatgaggaaccga
tccaaggagaaagaccgtgagaaggccgtctaccgccgctctatgtccatgaatgacctg
ctgcagacgatggcggtgtccgagggtcagtggtccagcagcactgatcatctggaagct
cctgatgggaaggagttcggatccatggactattccagtgctgctgccgaatacgccaac
ctgagccgcagccgcaacgctcgacaccacattgatacaggtaatgccatgtccagtgat
gacatcacacagttgtcctcagaggagtccagtgtgctgcgagctcagggcgtaatgaac
ggcagtgcgagcagagctcacagtgagagcagtggtgacatcagtgtgagtttggacagt
ccgcagcacagctcactggacggcaaacgcagggccaaatctggaggcagtgagatggtt
tccctgcagcagttcctgatcgagagcacagacccggcagaggacgctctggcagcacag
tcgggacgtgcgtctggagccgcgccacaggcgtctaaagagcgcgggaagggccgcggc
atcttgcgttcggccagcggcaaggcaccggcatcagaatctagcgccgcacgagccaac
caaccgggacgcccgagcctgcgtaaggccgagagcacacgtgccaagggctcagcacca
cctcgggccggcctttcgtcccagagtaaggcggtgtcggtgtcggagcggctggactca
tcatcaggtctgccccgcgccagcagcgtcatctccaccgccgagggcaccgtccgcagg
accagcatccacgacctgctctccaaggacagccggcagcccgttctggtcgacccgtcg
ccctccaggaccaagagcgcctccaatgtggaagtattacaggaaaacaggaagtctaaa
agaggtggcactcagagtctgtcatga
DBGET
integrated database retrieval system
