Ctenopharyngodon idella (grass carp): 127524547
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Entry
127524547 CDS
T08802
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127524547
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127524547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127524547
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
127524547
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
127524547
NCBI-ProteinID:
XP_051772096
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All DBs
Position
13:8129195..8156052
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AA seq
912 aa
AA seq
DB search
MAGALRMDDAQYPMKFDNESLQFMVDLPYLHEPFEVKHEPFVTETVHGPYLQIIEEPKQR
GFRFRYECEGPSHGGLPGASSERNRRTYPTVKVSNYVGHARVEVQLVTHTDPPRVHAHSL
VGRQCNDNGICSIDVGPNDLTAQFSNLGILHVTKRGVAEVLTKRLREEKRRTKEPGYKFS
DAEEQAIMQEAKELGKNMDLNIVRLKFTAYLQDSNGSFTRALKPVVSNPIYDSKSPNASN
LKISRMDKTSGSVLGGEEVFLLCDKVQKDDIDIRFYEEEDDSGWEAFGDFSPTDVHKQYA
IVFKTPPYRCTDITRPVTVFLQLKRKKGGDCSEPKQFTYIPHNQDKEEVQRKRMKALPQH
YDNWRGGPQGGAGAFGGPGSGTGGGGMGGGFQFNHPMDGSGFFIGGCGGFGGGAQMSGST
PQADGSQNQPTNKQNQSSSQMQQQLIQIATVLQNRATSMAKGTARALLQYCSTGDVRPLL
VLQRHLCGVQDENGDTPLHLAIIHQQPAVVQQLIQALNNTPQQKFINKLNNLSQSPLHLA
VITKQPKLVEVLMRTGADPSLQDREGRTALHLAAHTGDEAVLRVVLGLLGERYIHLINSA
DFSGQYPVHLAVRKDGEHCLRLLVEAGAKINMPEQKSGCTALHLAVRDNLLKLACNLITE
LKADVNVCTYGGNSPLHFAASQGSPPLCSMLIAAGADKRMENDEPLFLSSSSSDEDDEGE
KNDADRQLPDDMVQQVHLMSISSERGTFNPRKRPAAGHTPFDLAKCQKVRDLLDGRKGPK
PSSLAPKRTKISTDEVNQGLDSEVLMKLCGILIEDHVPWRELAEKLGMLTLTHLFQESAS
PCQKLLENYQLSGGPVDGLVEALQSLGVSEGVRLLTASQPREDKQSSDSTEDSGFGSQSI
GEGMGNPEVTNH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggctggagcactaaggatggatgatgcgcaatatccaatgaagtttgacaatgagtct
ttacagtttatggtggaccttccatatctccatgaaccttttgaagtgaagcatgaaccc
tttgtgacagaaacagttcatgggccttacctacagataattgaagagccaaagcagaga
ggattcagatttcgttatgaatgtgagggcccatcccacggtggtctgccaggggcctcc
agtgagaggaacagaaggacgtatcccacagtcaaggtttcaaactatgtgggtcatgct
cgcgtggaggttcagttagtgacacacacagacccccctcgtgttcatgcgcacagcctt
gtgggtcgtcagtgtaacgacaacgggatatgcagcattgatgttgggcctaatgatctc
acagcacaattcagtaatttaggaatcctccatgttactaagagaggtgtggctgaagta
ttaacaaaaaggctgagagaagagaagaggaggacaaaggagcctggatataagtttagt
gatgcagaggaacaggctattatgcaagaagccaaagaattgggcaaaaatatggaccta
aacattgtaaggttaaagttcactgcttaccttcaggacagcaatgggagtttcacaaga
gccttgaagcctgttgtttccaaccctatctatgatagcaaatcaccaaatgcttcaaat
ctgaagatctcccgaatggataaaacctctggatcagtgctgggaggagaagaggtcttt
ctgctctgtgataaagttcaaaaagatgatattgacatccgtttttatgaggaggaagat
gattccggatgggaggcatttggagacttctcccccactgacgtccacaaacagtatgcg
atcgtgtttaagacaccaccgtaccgctgcacagatatcacacgccctgtcacagtgttc
ctgcagctcaagaggaagaagggaggcgactgcagcgaacccaagcagttcacatatatt
ccacacaatcaagacaaagaagaagttcagaggaagaggatgaaggcacttcctcagcac
tacgataactggcggggaggacctcaaggaggagcaggggcctttggaggtcctggatct
ggaacaggaggaggtggaatgggaggaggttttcaatttaatcatccgatggatggttca
gggtttttcattggtggatgtggtggatttggtggaggggcacagatgtcaggctccacc
ccacaggctgatggatctcagaatcagccaacaaacaaacaaaatcagtctagctctcaa
atgcaacagcagctcattcagattgccacagttctgcagaatcgtgccacttcgatggca
aagggcactgctcgggctttgttacagtactgcagcacaggggatgtgcgccccctgctg
gttctgcagagacatctgtgtggagtgcaagatgagaacggagacacgcctctgcacttg
gccattatccatcagcaacctgctgtggtgcaacagcttattcaggccctgaacaacacc
ccacagcagaagttcatcaacaaactcaacaaccttagtcagtctccattgcatctggct
gtgatcactaagcagcccaagttagttgaggtgctgatgagaaccggggcagacccgagc
ctgcaggaccgagagggccggacagcgcttcacttggccgcacacaccggcgatgaggct
gtactacgagtggtcctgggcctgcttggagagcgctatatccatttaataaactctgct
gacttctcaggtcaatatccagtccatctcgctgtaaggaaggacggagagcactgtctt
cgattgctagtggaggcaggagcaaagattaacatgccagagcagaaaagtggctgtaca
gctctacacctggctgtgagggataacctgttaaaactggcctgtaatcttattactgag
ctaaaggctgacgtgaatgtgtgtacctacgggggcaacagtcctcttcactttgctgcc
agtcagggctccccacctctctgctccatgctgatagctgcaggtgctgataaacgtatg
gagaatgatgagcctcttttcctaagctcgtcttcatcagatgaagatgatgagggtgag
aagaatgatgctgataggcagcttcccgatgacatggttcagcaagttcacttgatgtca
atatcatccgagaggggaacatttaacccacgcaagagacctgctgcaggacacacacca
tttgacctggctaaatgccaaaaggttagagatctattagatggcaggaaaggccccaag
cccagttcactcgcccccaagaggaccaaaataagcactgatgaagtgaatcaaggtttg
gacagcgaggtgctcatgaaactgtgtggtattcttattgaagaccatgtaccctggaga
gagctggcagaaaaactgggcatgctcacactcactcatctgttccaggagagtgcctca
ccctgccagaagcttctcgagaactaccagttgagtggtggtcctgtggacggcctggtg
gaggcgctgcagtctctgggtgtgagtgaaggagtgagacttctgacagccagccaaccc
agagaggacaagcagagctcagattctacagaggacagtggctttgggagtcagtccatt
ggagaggggatgggaaatcctgaagtgaccaatcactga
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