Ctenopharyngodon idella (grass carp): 127524552
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Entry
127524552 CDS
T08802
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04080
Neuroactive ligand-receptor interaction
cide04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127524552
04082 Neuroactive ligand signaling
127524552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127524552
Ion channels [BR:
cide04040
]
Ligand-gated channels
GABA-A
127524552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
127524552
NCBI-ProteinID:
XP_051772110
LinkDB
All DBs
Position
13:complement(24549813..24580094)
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AA seq
480 aa
AA seq
DB search
MMRGMVIARDHWRAGILCLLVLVALTVGRSPPANSVNEPSNMSYVKVTVDKLLKGYDIRL
RPDFGGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRV
ADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDE
QNCTLEIESYGYTTDDIEFYWQGGSSVTGVDNIELPQFSIIDYKTLSKKVVFATGSYPRL
SLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHL
RETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNNEK
SNKVQVDVHGNIPLTNLDLRLSGAEMLGALGDPRNTMFSYDSASIQYRKPLTGRDLYGRP
TASLERPMARKKSHLKRRAAQLKVKIPDLTDVNAIDKWSRVIFPITYTFFNLVYWLYYVH
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagggatggtgatcgctcgggatcactggcgcgcggggatcttgtgtctcctc
gtgctcgtggctttgacggttggccgtagcccgccggcgaacagtgtaaatgaaccaagc
aacatgtcatacgtcaaagtcaccgtggataaactactcaaaggctacgacatccgtctc
aggcctgactttggaggtcctccggttgatgttggtatgagtattgacatctctagtatc
gacatggtgtcggaagtgaacatggactataccatcaccatgtatttccagcagtcctgg
cgcgataagcgtctgtcctacacagggatccctctaaatcttactctggataaccgagtg
gctgatcaactctgggtgcctgatacttacttcataaacgacaagaaatcttttgttcat
ggggtcacagtgaagaaccgcatgatccgtctgcatcctgatgggactgtgttgtacggc
ctcaggataactaccacagctgcatgtatgatggatttgcgcagatatccgctggatgag
cagaactgcacactggagattgaaagttatggctacactacagatgacattgagttctac
tggcagggaggaagttcagtgacgggggtggacaacattgagctgccgcaattctctatt
attgattataaaacgctgtctaagaaggttgtgtttgccacagggtcgtatcctcgtctg
tctctcagttttaaactaaagaggaacattgggtatttcatcctacagacctacatgcct
tcaacactgatcaccatcctgtcctgggtctccttctggatcaactatgatgcttcagct
gcaagagttgctctaggaatcaccaccgttctgactatgactacaatcaacactcatctt
agggagactttacccaagatcccttatgtgaaggccatagacatctatctgatgggctgt
tttgtctttgtgttcctggccttgctcgagtatgcgttcgtcaactacatattcttcggc
cgtggtccacatttacagaagaaagtggcagaaaaagctgcaaaaagcaacaatgagaag
agtaacaaagttcaggttgatgtccatggaaacattcccctgacaaaccttgatctgcgc
cttagcggggcagagatgttaggtgctcttggggacccaaggaacaccatgttctcctat
gacagtgccagcatccaataccgtaagccccttacaggtcgggacctctatggccggccc
actgcctctctcgagaggccaatggcacgaaaaaagagtcatcttaagaggcgagccgct
cagctgaaggtgaagattccagacctgacagacgtgaacgccattgacaagtggtcacgt
gtcatctttccaatcacttacaccttctttaacttagtatactggctgtattatgtccac
tag
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