Ctenopharyngodon idella (grass carp): 127524599
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Entry
127524599 CDS
T08802
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127524599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127524599
Membrane trafficking [BR:
cide04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
127524599
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Laminin_II
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
127524599
NCBI-ProteinID:
XP_051772213
LinkDB
All DBs
Position
13:complement(14217308..14223753)
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AA seq
225 aa
AA seq
DB search
MSSEEFEKLHEMYKSLYAEVKLIPERAQRCQGEERKRIVRDFDERVSEAEEVLQGMEQEL
FGAPSSFRTPMSTKIRLYRRDLAKLQRDIRLSATPGFSSHLGDSRQGIYAAQNDQSTHLQ
SQRALLIQGTESLNNASKSIERSQQIAAETDQIGTDIIEELGEQREQLDRTRDRLVHTGE
NLSRSRKILRTMSRRLVTNKLLLSVIIIMELAILGAVVYLKFFRK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgaggagtttgaaaagctgcacgagatgtataaatctctatatgccgaagtg
aagttgatacctgaacgggcgcagaggtgccagggagaggaaaggaagaggattgtcagg
gactttgatgagcgtgtttcagaggctgaagaagtgcttcagggcatggaacaggagctg
tttggtgctccgtcatcctttcgaacccccatgtcaacaaagattcgactgtaccggcga
gatttggcaaaactgcagagagacatacgactctcagcaacaccagggttttcaagtcac
cttggggacagcagacaagggatatatgctgcacagaatgaccagagtactcatcttcag
tcccagcgtgctttgctcatccaggggacagagtctctaaataatgcgtcaaaaagtatc
gagcgaagtcaacagattgcggcagagaccgaccagattggcacagacatcattgaggag
cttggagaacagagagaacaactggaccgcacaagagacagattggttcacactggagag
aacttgagccgcagcaggaaaatcctgcgcacaatgtccagacgactggtgacgaacaaa
ctcctactatcagtcattatcatcatggagctggccatcttaggggcggtggtttacttg
aagttctttcgcaagtag
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