Ctenopharyngodon idella (grass carp): 127524708
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Entry
127524708 CDS
T08802
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127524708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127524708
Spliceosome [BR:
cide03041
]
Common components
Common spliceosomal components
SR proteins
127524708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
DUF4090
OB_RNB
QWRF
Motif
Other DBs
NCBI-GeneID:
127524708
NCBI-ProteinID:
XP_051772447
LinkDB
All DBs
Position
13:complement(16595938..16600189)
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AA seq
311 aa
AA seq
DB search
MCLRIRERDSPPITLPPAREHAYKCFCARPRPSVSRPTPFCPVSRDFLESLITMSGCRVF
IGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKELCSERV
TIEHARSRRGRGGGPGMGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRIIVENLSSRISWQ
DLKDLMRKVGEVTFVDAHRTNKNEGVVEFASHSDMKNAIEKLDGTDLNGRKLKLYEDRKR
NRSRSRSRSRSSSRSRSPSRSRSPERGSKRSRSRSASRTPEKNTSNRSPSRSPSPPRKQS
RSRSASAESQH
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttacgtatacgtgaacgagactcgcctcccattaccctcccccctgcgcgtgaa
cacgcatataaatgcttctgcgcgcggccgcgtccctcagtctcgaggccaacgccattt
tgtcctgtaagcagagatttccttgaatctttaatcacaatgagtggatgtcgcgtgttc
atcggccgtctgagcccccatgctcgggaaagagacgtggagaagttctttaaaggctac
ggacgtatcagggagattaacctgaaaaacgggtttggctttgtggagtttgacgaccac
agggacgcagatgacgcagtgtatgagctgaatggaaaagagctgtgcagcgagagggtg
actatcgagcatgctcgctctcgcagaggaagaggtggcggcccaggaatgggaggacgt
ttctctccacgctttggagggtatcgtcagtcccgcagtgggggttccaggtatggacca
ccagtgcgcacggagcacagaatcattgtggagaatctctcctctcgcatcagctggcag
gatctgaaggacttgatgaggaaggtgggagaagtgacctttgtggatgcacacaggacc
aataagaatgagggggtggtggagtttgcttcgcacagtgatatgaagaatgccatcgag
aagctggatggaacagatctgaatgggcgcaaactcaagctgtacgaggatcgcaagagg
aatcgtagcaggagtcgttcccgcagcaggagcagctcccgttcccgttcgcccagtcgg
agtcgcagccctgagcgtggaagcaagcgctctcgcagccgctcagccagtcgcaccccg
gagaagaacaccagcaaccgctctccttcccgctcgccgtctcccccgaggaaacagagt
cgctcccgatctgcctctgcggagagtcagcactga
DBGET
integrated database retrieval system
