Ctenopharyngodon idella (grass carp): 127524777
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Entry
127524777 CDS
T08802
Name
(RefSeq) calpain 2, (m/II) large subunit a
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04141
Protein processing in endoplasmic reticulum
cide04210
Apoptosis
cide04217
Necroptosis
cide04218
Cellular senescence
cide04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127524777
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127524777
04217 Necroptosis
127524777
04218 Cellular senescence
127524777
09144 Cellular community - eukaryotes
04510 Focal adhesion
127524777
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127524777
Enzymes [BR:
cide01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
127524777
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C2: calpain family
127524777
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
127524777
NCBI-ProteinID:
XP_051772610
LinkDB
All DBs
Position
13:complement(4087212..4104023)
Genome browser
AA seq
698 aa
AA seq
DB search
MSGVASTLAKKRALAAGFGTNTNAVKYLNQNFEGLRSECLSRGELFCDTTFPAAPESLGF
NELGPRSPKTRGVVWKRPGELTSSPEFIVGGATRTDICQGGLGDCWLLAAIASLTLNDDV
LARVVPSNQGFGQDYAGIFHFQLWQFGEWVDVVVDDRLPTRDGELLFVHSATGSEFWSAL
LEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAEMYELKSAPSNMFQIIRKALDSGALLGC
SIDITSAADSEAITYQKLVKGHAYSLTGAIEVNYRGRKEKLVRVRNPWGQVEWTGAWSDD
SSEWSAVDPSERENVKAEDGEFWMSFSDFVRQYSRLEVCTLTPDTLSSDSVKHWSTCKFD
GTWRRGSTAGGCRNHPYTFWMNPQFKIKLEEEDDDPDDNEVGCSVVIGLIQKNRRKMRKS
GEDMHTIGYAIYEVPPQFHGQKEVHLDKNYFLSHAQKARSETFINLREVSTRFKLPPGEY
LIVPSTFEPHKNGDFCVRVFSEKQSEMQQCDDPVEANIEDETVSEDEVDAGFRGLFTKLA
GDDMEISAIELRTILNKIVAKRTDIKTDGFSSDTCRVMVNLMDESGNGKLGLSEFATLWK
KIQKYLVIYKKNDMDGSGCMSTPEMRMALKEAGFSLNDCIHQNLAARYGDADMTIDFDNF
VSCVMRLEMMFKVFKRIDMDNSGFIELDFFQWLTFAMI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggtggcatccacactcgccaagaagagagccctggctgctggctttgggacg
aacaccaatgccgtgaagtacctgaaccaaaactttgagggtctgagaagtgagtgtctg
agccgcggggagctgttctgtgatacaacgttcccagccgctcccgaatctctgggcttc
aacgaactcggtccacggtcgccaaaaaccagaggtgttgtgtggaaaagacctggggaa
ctgacctccagtcctgagtttattgttggaggagctacaagaacagatatttgccaagga
ggtttgggtgattgctggctcttagcggccattgcatcactaaccctcaatgatgatgtt
ttggctcgtgtcgtaccatccaaccagggctttggacaagactatgctggaattttccac
tttcagttgtggcagtttggggaatgggtggatgtggtggtggatgatcgattgcccact
agagatggagaactgctgtttgttcattcggccacaggctctgagttctggagcgccctg
ctggagaaggcctatgcaaaagtaaatggatgttatgaagctctgtctggaggttccaca
actgaaggttttgaagatttcaccggtgggattgcagaaatgtacgagttgaaaagcgcg
ccatccaacatgttccaaatcatcaggaaggccctggactctggagctctgttgggatgc
tccatagatatcaccagtgcagcagactctgaggccatcacttatcagaagcttgtgaaa
ggacatgcttactcacttactggggcaattgaggtaaattaccgaggtcgaaaggagaag
ctggtcagagttcgtaatccttggggtcaggtggaatggacgggggcctggagtgacgac
tcttctgagtggagcgctgttgatccatctgaacgtgagaatgtgaaggcagaagatgga
gagttttggatgtcattctcagattttgtgaggcaatattcccgcctagaggtctgcact
ctgacaccagacacgctgagctcagactctgtcaaacactggagtacatgtaaattcgat
ggcacctggagaagaggctctactgctggtggctgcaggaaccatccatacaccttctgg
atgaatcctcagtttaagatcaaactagaggaggaagatgatgatcctgatgataatgaa
gtaggctgcagcgtggtgattggcttgattcagaagaaccggcgcaaaatgaggaagtct
ggagaggacatgcacactattggctatgccatctatgaggtgcctccacagttccatggg
caaaaggaagttcacctggataagaactatttcctgagccacgctcagaaagctcgatct
gagacctttattaacctgagagaggtcagcacccgctttaaacttcctcctggagaatat
ctcatcgtcccatccacattcgaaccgcacaagaacggagacttctgtgtgcgtgtgttc
tccgagaaacagtctgagatgcaacaatgcgatgaccctgtagaggcaaacatagaagat
gagacagtgtctgaagatgaggttgatgctggctttaggggactgtttactaaacttgct
ggagatgacatggagatctctgccattgagctgcgaacaattttaaacaaaatagtcgct
aaacgaactgatataaagacagatggtttcagttcggatacttgtcgagtcatggtgaac
ctcatggatgaaagtggcaatggtaaactggggttatctgagtttgccactctttggaag
aaaattcaaaagtatctggtcatttataagaagaatgacatggatgggtccggctgtatg
agtacaccagagatgcgcatggctttgaaagaagcaggattctctctgaatgactgcatt
catcagaatctggctgcacgctatggagacgcagacatgaccatcgacttcgataacttt
gtgtcctgtgtgatgcgtctggagatgatgttcaaagtgttcaagaggatcgacatggac
aacagtgggttcattgagttggacttcttccagtggctgacatttgctatgatttaa
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integrated database retrieval system
