Ctenopharyngodon idella (grass carp): 127524786
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Entry
127524786 CDS
T08802
Name
(RefSeq) integrin alpha-9 isoform X1
KO
K06585
integrin alpha 9
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
cide04514
Cell adhesion molecules
cide04810
Regulation of actin cytoskeleton
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127524786
04514 Cell adhesion molecules
127524786
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127524786
09142 Cell motility
04820 Cytoskeleton in muscle cells
127524786
04810 Regulation of actin cytoskeleton
127524786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127524786
Cell adhesion molecules [BR:
cide04515
]
Integrins
Integrin alpha subunits
127524786
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
127524786
NCBI-ProteinID:
XP_051772634
LinkDB
All DBs
Position
13:27732034..27835455
Genome browser
AA seq
1032 aa
AA seq
DB search
MRNRMTELSTRKRSALDVFVYLCFVSLAYSFNIDLKHPVVFRGPDATFFGYSVLEHVHDN
TRWIVVGAPRANSSYSSSVQSPGALYKCRIRNNPEQRCTEMDLGRGNKQKESCGKTCQGD
RDNEWMGVSLARQDKTNGKILACAHRWKNVYYESEYILPHGYCSVIPATLQGKSQPLIPC
YEDHKKTYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTVKVFNMTSNTLYNLNQDDL
SPQRYSYLGYAVTAGHFSSPNTIDVAAGAPQDSGGGKVYIFRIEGTSLVKTFQASGKMMG
SYFGSSLCAVDLNADGLSDLLVGAPMHSEIRDEGQVSVYLSSGNGVMEEVAVLSGDNAYN
AHFGECISSLGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDATGIVNKYSMKLSGRSINP
TLQMFGQSISGNVDMDGNGYPDVTIGAFMADSVVLLRSRPVISVDVSIFLPVSINITVPQ
CHEGPQHLNCFNVTICMSFRGKHVPGHIELLYNLTADAEKRHKGLPARVYFGNGVEQTGA
VSQLFSLEINRQQCHQYTSFVRKEVKDVFAAIVFEAAYSLGKHVVDGYQDRDLPSLTPVL
RWKKGEKIATKNETWFEKNCLSEDCAADLRLHGKLLLSGRYISSHLALGGVRNVSLNLTI
SNAGDDAYDTNIYFNFSREVHYINFLQREEKGISCMLVELDFLKCSIGFPFMRAQTKYHL
SVLFDTSHLSGENETLLFLVHAKSANPEHDSTLHDNTLELSIPLVHEVDTAITGVVTPTS
FVYGNSVDRSRFLQLEDMECSFQPLNFTFQVINNGPSRLPGSRMDIRIPNRLAGNGPDMF
HIIDTQVSDGRGNCTWHRNPKPCTIPQDKESIFHTIFAFFTKSGRKVLDCDRPGRACQTI
SCSLGSQAKEEAISIDVQILLNTEILQRDSSSVIQFVTRGHVQLDDRAVEVSTGLPEEIS
LVFEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRHYREIIEAEKNRND
SDESWDWVQKSQ
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacagaatgacggaactttctacacggaaaagaagcgctttggatgtttttgtg
tatttgtgttttgtttccttggcttattccttcaacattgacttgaaacatcctgtggtg
tttcggggaccagatgcgacgttttttggatattcagtcctggagcacgtccatgacaac
acacgctggattgtggttggggctcccagagcaaactcctcttacagtagttcagttcag
tcacccggagccttgtacaagtgccgaatccgcaacaacccagagcaacgctgcactgag
atggaccttggcagaggaaataagcagaaggagtcctgcgggaagacgtgtcaaggcgac
agggacaacgagtggatgggggtcagtttggctcgacaggacaaaaccaacggcaaaatt
ctggcctgcgctcaccgctggaagaatgtatattatgaatcggagtatattcttccccac
ggatactgctccgtcatcccagccactctgcagggcaaatcacagcctctcataccgtgt
tatgaagaccataagaagacctatggggaagaacatggctcgtgccaagccgggatcgca
ggcgttttcactgaggagcttgttgtcatgggtgcacctggttcttactactggaccgga
acagtcaaagtgtttaacatgacatccaatactctctacaaccttaatcaagacgacctg
agccctcaaagatacagttacctcgggtatgctgtgaccgctggtcacttttcctctcca
aacaccattgatgtggcagctggtgctcctcaagacagtggtggtggaaaagtttacatc
ttcagaattgagggaacgtctcttgtgaagacatttcaagcctcagggaaaatgatgggc
tcttactttggctcctcattgtgtgcagttgacctaaatgcggacggactgtcggacttg
ctggtgggagcacccatgcacagcgagatccgggatgaaggccaggtttctgtttacctc
agcagtggtaatggagtaatggaggaagttgcggtattgagcggtgacaatgcatacaat
gctcattttggagagtgtatctcgtctcttggggacattgatgacgatggctaccaagat
gttgcaattggagcccctaaagaggacgactatggaggagctgtttacatctatcatggc
gatgccacaggaatagttaacaagtactcaatgaaattgtctgggcgaagcatcaacccc
accctccaaatgttcggccagtcaatttccggcaatgtggacatggatggaaacggatat
ccagatgtgacgataggggcgttcatggctgacagtgtggttttattaagatccaggccg
gtgatctctgtggacgtctccatatttttgcctgtctcaataaacatcacagtaccgcag
tgtcatgagggcccacagcatctcaactgcttcaatgtcaccatctgcatgagctttcga
ggaaaacatgtgcctggccacatagagttgctgtacaatctaacagcagatgcagagaag
agacacaaaggtctgccggcccgggtgtattttggaaacggcgttgagcagacaggtgct
gtaagtcagcttttcagcctggagatcaaccgacagcagtgccatcagtacacgtccttt
gtaaggaaagaagtgaaggatgtgtttgccgccatcgtgtttgaggcagcgtacagttta
ggaaaacacgtcgtggatggatatcaggaccgcgaccttccctctctgactcctgttcta
cgctggaaaaaaggagagaagatcgccacaaagaacgagacgtggtttgagaagaactgt
ctgtcagaggactgtgccgctgacctgaggcttcatgggaaactgctgctttctgggcgt
tacatcagttctcatctggctcttggtggagtgagaaatgtgtcattaaatttaaccatc
tctaatgctggagatgacgcctatgacaccaacatctacttcaacttctccagagaggtt
cattacatcaacttcttacaaagagaagagaagggcatttcctgtatgctggtagagctg
gacttcctcaagtgcagcattggatttcctttcatgagggcacaaaccaagtaccatcta
tcggtgctgttcgacacgagtcatctatctggtgaaaatgagacactgctgtttttagta
catgctaaaagtgccaatccagaacatgatagcacacttcatgacaacacactggagttg
tccataccgctggtgcatgaggtggacacagcaatcacaggtgtggtcacccctacgtct
tttgtgtatggaaactcagtcgaccgatcacgcttccttcagctggaagacatggagtgc
agctttcagccgctcaacttcacctttcaggtgataaacaatgggcccagcagacttcct
ggctccaggatggacatcaggatacccaaccgcctggctggtaacggaccagatatgttc
catatcattgacacacaagtatcagacggtcgagggaactgcacgtggcacaggaacccc
aaaccctgcacaatcccacaggacaaggagagcatcttccacaccatttttgccttcttc
accaaatccggcagaaaagttctggactgtgaccggcctggcagagcgtgtcaaactatt
tcctgcagtctgggctctcaggctaaagaagaggccataagtatagatgtgcaaatacta
ctgaacactgaaatactgcagagggacagctcctctgtgatccagtttgtgacacgaggt
cacgtccagctggacgacagggccgtggaggtctccaccgggcttcccgaggagatttct
ctggtgttcgaggcccttcacagtcaggagcccaggggttacgtggtgggatggatcatc
gccatcagcctgctggttgggatcctcatcttcctgctgctggctgtgctgctctggaag
atgggattcttcaggaggcattacagagagatcatagaggcggaaaagaacaggaatgac
agcgatgaaagctgggattgggtccagaagagccaatga
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integrated database retrieval system