Ctenopharyngodon idella (grass carp): 127524823
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Entry
127524823 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: F-box only protein 11a
KO
K10297
F-box protein 11
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127524823
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127524823
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
zf-UBR
F-box
Motif
Other DBs
NCBI-GeneID:
127524823
NCBI-ProteinID:
XP_051772745
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All DBs
Position
13:27513181..27544152
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AA seq
879 aa
AA seq
DB search
MNSVRATNRRPRRVSRPRPVPPDRNNAERDEADPAEMVAEESGQGAQNSPYQLRRKSLLP
KRTACPTKTNMEGASTSTTENFGHRAKRARVSGKSQDLPGTPAEQYLQVKLPDEVVXKIF
SYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPESGKFYQINPEEYEQ
PNPWKESFQQLYKGAHVKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGLI
FVHSGIYTDEWIYIESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTIKF
NPDDKSAQHHNAHHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQGASPTIKHCNISDC
ENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGY
FESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGV
WITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHNK
IHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDN
GHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGFIEDNEIFDNA
MAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPVL
RKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIEK
AVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFC
DCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagcgactaaccgcagaccccggcgagtgtcgaggccgcgcccggta
ccgccggacagaaacaacgcagaaagggatgaggcagatcctgccgagatggttgcagaa
gaatccggtcaaggcgctcaaaatagtccgtaccaacttcgaagaaaatctctgttaccg
aagagaacagcttgtccaacaaagaccaacatggagggtgcttccacgtcaacaacagaa
aactttgggcatcgggcaaaacgtgccagagtgtcgggaaaatcacaagatttacctggt
accccggcggagcagtacctgcaggtcaagcttcccgacgaggtggtcnctaaaatcttc
tcctatctgttggagcaggacctgtgtcgagcggcctgtgtgtgtaaacgttttagtgaa
ctagccaacgaccccatcctctggaagagactctacatggaggttttcgagtacacacgt
cccatgatgcaccccgagtctgggaagttctaccagatcaacccagaggagtatgaacag
cccaatccctggaaggagagctttcagcaactgtataaaggtgctcatgtgaagcctggc
ttcgcagaacatttctacagtaacccggccagatacaagggacgagaaaacatgctgtat
tatgacaccattgaagacgctctgggaggggttcaggaagcccattttgacggtttgata
tttgtccactctgggatctacacagatgaatggatctacatcgagtcgcccatcacaatg
attggtgctgctccagggaaagtagcggataaagtcatcatcgagaacactagagattca
acgtttgtgttcatggagggatcagaggacgcgtatgtaggatatatgacaataaagttc
aatcctgatgacaaatcagctcaacatcacaacgctcatcactgcctggagatcaccgtc
aactgcagccccatcattgaccactgcatcatccgcagtacctgcacagtgggctctgca
gtgtgtgtcagtggccagggagcgtcacccaccatcaaacactgtaacatcagtgactgt
gagaatgtagggctctatatcacggaccacgcacagggcatttacgaagacaacgagata
tccaataatgctctagcggggatctgggtgaaaaaccacggcaatcccatcatcagacgg
aaccacatccatcacggcagagatgtcggggtgttcacgtttgaccatggcatgggctac
tttgaaagctgcaacatccacaggaaccggatagcaggtttcgaggtgaaggcgtatgct
aaccctacagtagtgcgctgcgagatccatcacggacagacgggcggcatctacgtgcac
gagaagggccgaggccagttcatcgagaacaagatctatgcaaacaactttgcgggtgtg
tggattacctcaaacagcgaccccacgatcaggggtaacgccatatttaatggcaaccag
ggtggtgtttacatattcggcgacggccgaggtctcatcgaagggaacgacatctatggc
aacgctttagctggaatccagatccggaccaacagctgcccgattgtccggcacaataag
atccacgacggacagcatggaggcatttatgtgcatgagaagggtcagggtgtgatcgag
gagaacgaggtgtacagcaacacgctggccggtgtgtgggtgaccacgggcagcacacct
gtgctccgcagaaacaggatacacagtggaaaacaggtgggcgtttatttctatgataat
ggtcacggggtgctagaagacaacgacatctataaccacatgtactctggagttcagatc
agaactggcagcaatcccaaaattaggaggaataagatctggggtggacaaaatggagga
attcttgtttacaattcaggtttaggctttattgaagacaacgagatctttgacaacgcc
atggctggggtttggattaagaccgacagcaaccccacactccgcaggaacaagatccac
gacgggagggacggaggaatctgcatattcaacggaggacgagggttgctggaagagaac
gatatcttcaggaacgcccaggcgggagtcctcattagcactaacagtcaccctgtgctg
cgcaagaacaggatattcgacggatttgctgctggtattgagatcacaaatcacgcaacg
gcgacattagaaggcaatcagattttcaacaaccgcttcggtgggttgtttcttgcatct
ggtgtcaacgtcacaatgaaagacaacaaaatcatgaacaatcaggatgccattgagaaa
gcggtgagcagaggtcagtgcctgtacaagatttccagttacaccagctatccaatgcac
gatttttacaggtgtcacacctgtaacaccacagaccgcaacgccatctgtgtgaactgc
atcaagaaatgccatcaagggcacgacgtagaatttattagacatgataggtttttctgt
gactgcggcgcagggacgttgtcaaacccgtgcacactagccggagagccgactcacgac
acagacacgctgtacgattcggcccctcctatagagtccaacacgctgcagcacaactga
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