Ctenopharyngodon idella (grass carp): 127524855
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Entry
127524855 CDS
T08802
Name
(RefSeq) poly(A) polymerase gamma
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127524855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127524855
Enzymes [BR:
cide01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
127524855
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
127524855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DUF4269
Motif
Other DBs
NCBI-GeneID:
127524855
NCBI-ProteinID:
XP_051772821
LinkDB
All DBs
Position
13:complement(9871968..9882634)
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AA seq
746 aa
AA seq
DB search
MKEMSTTGDSTLGGQQPRKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELN
HRLAVLGKLNSFVKEWIAEISESKNLPPSAVANVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVERTDFFSSFFEKLKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIP
DNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSN
MLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWS
KLFEPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQ
SFPGSKENRNENEFVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKD
GMTIEATHVKKKQLHHYLPPELVQRKKKSLGDINRSSNGGGSKRCSLDSSQLDSSRDTDI
GTPFSSPTPVSNPCPPVSTPEDSISPPSHPVLVFMDSPPTSELSPPKPEQGMSIPVIGSK
PITTPVAKPPTPPTGNTIPTVVGRSVIPRITSSSPSPTDLPNSVNGAPKRPHSPSLEDPP
KRHKDTEVFSDDSAFKEPYPPASNGVDGEDGQTVEGLAATKPMPIPTIDTSRSQRLPSKE
LPDASSPIPTSNLRVIKNSIRLTLNR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatgtcaacgactggtgacagtacgcttggcgggcagcagcctcggaaacat
tatggcatcacatcttcaatcagcctggcctttcccagagagatagaccatatttacact
cagaagctcactgaggctatgaaaccatttggggtgtttgagggtgaagatgaactcaat
cacaggcttgctgttcttgggaagctgaattcatttgtgaaggagtggattgcagaaatc
agtgaatcaaagaaccttccaccgtcagcagtagcgaatgttggtggcaaaatctttact
tttgggtcatataggttgggagtgcacacaaaaggtgctgatatagatgctttgtgtgtt
gccccacgtcatgtggaaagaactgactttttttcatctttctttgaaaaactaaaacgg
catgatgagattaaggatctacgggctgtggaggatgcatttgtgccagtgatcaaattt
aagtttgatggcattgagattgatcttctgtttgccaggctcgctctacagtctattcct
gataacctggacctgagaggagactctctcctcagaaacttggacatcagatgcattcgc
agtctaaatggttgccgtgttacagatgagatcctgtatttggtgcctaataaagagaat
ttcagattaacattgagagcaattaaattgtgggccaaacgccgtggaatctattccaac
atgctaggctttctgggtggagtgtcctgggctatgctggtggccagaacatgtcagctc
tacccaaatgctgttgccgccacacttgtgcacaagttctttctggtcttctctaaatgg
gaatggccaaacccagtgcttttaaaacaacctgaagacagcaatttgaatctgccagtc
tgggatccacgggtgaatccatcagataggtatcacctgatgccaatcatcacacctgca
tacccacaacagaactctacctacaatgtgtctacttccacacgcaccatcatgagtgaa
gagttcaagaatggtctcactgttacagatgaaattcttcagggtaaagccgactggtcc
aagttgtttgaacctcccaactttttccagaagtacaagcattacattgtccttactgcc
agtgcatccactgaggaaaaccatctagagtggattggactggtggaatcaaagataaga
gtgttggttggaaatttggagcgcaacgagtacatcactcttgcccatgtcaacccacag
tcttttcctgggtcaaaagagaaccgcaatgagaatgaatttgtttccatgtggtttatt
ggaatcagcttcaaaaaactggacaattctgattgtgtgaatattgacttgacctacgac
atccagtccttcacggatactgtttataggcaggctagcaacatcaacatgctgaaggat
ggcatgactattgaggccacacatgtgaagaagaaacagttgcatcattacctgcctcct
gaacttgtgcagagaaagaagaagagtttgggagatataaaccggagctcaaacggtggt
gggtcgaagcgttgctcactggatagcagtcagctggacagctccagggacacagatatc
ggcaccccgttcagctcgccaacaccagtcagcaatccatgcccgcctgtctccacacct
gaagacagtatcagtccacccagtcatccagtccttgtattcatggacagcccaccaaca
tcagaattgtcgcctccaaaaccagaacagggaatgtccataccagtcatcggctccaag
cccatcactactccagttgccaagcctccaacacctcccactggcaacaccattcctaca
gtggtgggccgcagtgtgataccacgcattacctcttcctcccctagcccaactgacctg
cccaacagtgtcaatggagcaccaaagagacctcactctccatctctggaggatccacct
aagaggcacaaagacacagaggtgttttctgatgactctgcgtttaaagaaccgtatcct
ccagctagcaatggcgtggatggtgaagatgggcaaacagtggagggtcttgcagcaacc
aaacctatgccaataccaacaattgatacatcaagatcacagagattacccagtaaagag
cttccggatgcatcttccccgatccccacaagcaacctccgtgtgattaaaaattcaatc
aggctcactcttaaccgataa
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