Ctenopharyngodon idella (grass carp): 127524868
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Entry
127524868 CDS
T08802
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127524868
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127524868
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127524868
Membrane trafficking [BR:
cide04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
127524868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
127524868
NCBI-ProteinID:
XP_051772883
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All DBs
Position
1:complement(42585538..42603500)
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AA seq
1010 aa
AA seq
DB search
MSSNPIPQSSGGGGRGGGTSDGLFQKPRDPSMAPRHYRTPRSLPDVCPKEPTGDGRGLCD
GPSVVADQHRWTVYNSKVNLPAALNDPRLAKRESDFFTKTWGLDFAETDVMPSFYLPNIT
REHFSSYLQETAQREKIHERCKNVCPNKDDLSVPTITNNHDKARAELEQVPKIFMKPEFV
LNDPATFNAVLPWSHFSVAGGKNSRDVASSRLLQEKLSHYLDVVEVSIARQISFRSEAFF
HAMSSQHELQDQMRETADAVAKLRARTAAIDRVMCRGPLRALRDALTRNNCVKLHNKLKL
MAAVHQTQPTVQLLLSTSEFVGALELIATTKEVLQQELQGIHSFRHLGSQLCEMERLIDK
MMVADFSTYAQSDLNRPFEEDSQVMEKITKQPAASGKDRLQSLVFGLLRQRKLDFLDIYS
DEMIRAAKNVVRQCVVKSVSQISEIDADTVKFHEQMRLMTFHQWFDLLLDIFEHFILFLK
RIKATLSVIRNVVLEVLDSSQRSRLAEVTSATNHSNEDEEESGGSALHSGEAELAYLTHE
GLFISDALNEAEQRSSITAQARAQTRAEACGSDSASATTESSSSREHNSNTTSSLPIGGA
AAIRESNISLLSGSSEDVMPSDLELGRVANNVQELLYTASDVSHDRCVKVLMTRAKDGSL
ERLSSAEFVCLSQAVESFVKDTEEECGRRSMSLRGALQSQANRFVQRFHEERKTKLSLLL
DNERWKQAEVPAEFQDLVDSIADGRISLPDRKHTGSEDRKPSEFLCVDGQKYAVVGTVLL
LIRMFLEYCQCVNDIPSITTDILTRLTDLLKHFNSRSCQLVLGAGALQVVGLKTITTRNL
ALASRCLQLVVHYIPVIRAHFETRLQPKQYSVLRHFDHITKDYNDHIAEISAKLVAIMDS
MFEKALSKYEVKAPMPSACLRNVCKQMAKMHEAIYELLPEEQTQMLFLRINARFNLHLKR
QLARLGVINDGGPQNGLVMVDVAFYSENVQALRSLECLDLNMPEIWEQKR
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaatcccatacctcagtccagcggaggaggaggaagaggcggcggcaccagc
gatgggctcttccagaagccccgggacccttcaatggcccccagacactaccgaacccct
cgctccctcccggacgtctgccctaaggagcccaccggtgatggccgtggcctctgtgac
ggcccgtctgtagtggccgaccagcatcgctggactgtatataactctaaagtgaacctc
cccgcggccctgaacgaccccaggctggccaagagagagtcggacttcttcactaagacg
tggggcctggactttgccgagaccgacgtcatgccttcattctacctacccaacatcacc
cgagaacacttcagctcctacctgcaggaaacggctcagagggagaagatacacgagcgc
tgtaaaaacgtctgcccgaacaaagacgacctgtcggtgcccaccatcaccaataatcac
gataaagccagagctgaactagagcaggtgcccaagatcttcatgaagcctgagtttgtg
ctgaacgatccagccaccttcaatgccgtgttgccatggtctcatttcagcgtcgctggg
ggcaagaacagccgagatgtggcatcgtcacggttattgcaggaaaagttgagtcactat
ctggacgtggtggaggtgagcatcgctcggcagatctcttttcgctccgaggcctttttc
cacgccatgtcgtctcagcacgagctccaggaccagatgcgagaaacggccgacgccgtg
gccaagctgcgcgcccgcaccgccgccatcgatcgagtgatgtgccgcgggccgctgcga
gcgctgcgggacgctctgacccgcaacaactgcgttaagctgcacaataaactcaagctg
atggccgccgtgcaccagacgcagcccacggtacagctgctcctctccacctccgagttc
gtgggggcgctggagctcatcgccaccaccaaggaagtgctgcagcaggaactgcaggga
attcacagcttcagacatttgggttctcagctctgtgagatggagaggttgatcgataag
atgatggtggctgatttctccacatacgctcaaagcgatctcaatcgcccctttgaggag
gacagtcaggtcatggagaagatcacaaagcagcctgcagcgtcaggaaaggatcgtctg
cagtctctggtctttggcctgttgagacagaggaagctggatttcctggacatctacagt
gacgagatgatccgcgctgccaagaacgtcgtacggcagtgtgttgtgaagtcagtgtcg
cagatcagtgagattgatgcagacactgtcaagtttcatgaacagatgcgcttgatgacc
tttcatcagtggtttgatctgctgctggatatatttgaacacttcattctgtttcttaag
aggatcaaggccacgctcagcgtcatccgcaacgtcgtgctggaggtgctcgacagcagc
cagaggagtcggctagcagaggttacctcggcaactaatcattccaatgaggacgaggag
gagtctggaggctccgcccttcattcgggggaggcggagcttgcgtatctcactcatgag
gggcttttcatcagcgatgcgctcaatgaagcggagcagcgcagcagcattacagcgcag
gccagagcgcagacacgcgcagaggcctgcgggagcgactcggcctcagcaaccaccgaa
tcttcctccagcagggaacacaactccaacactacctcctccctgcccatcgggggcgct
gctgcaatcagggaaagtaatatcagtcttctctctggcagcagtgaggacgtgatgccg
tctgatctggagttgggtcgagtggccaataacgttcaggagctgctgtacacggcgtca
gatgtcagtcatgaccgctgcgttaaagtactcatgacacgagccaaggacggctctctg
gagcgcttgagctcggcggagtttgtgtgtttgagtcaggcggtggagtcgttcgtcaaa
gacactgaagaggagtgcggcaggcgcagcatgagcctgaggggagcgctgcagagtcag
gccaaccgcttcgtgcagcgcttccacgaggagcgcaagactaaactcagtctgctgttg
gataatgagcgctggaagcaggccgaggtccctgcagagtttcaggatctggtcgactcc
atcgccgacggacgcatcagtctgcctgaccgcaaacacacagggtccgaggacaggaag
cccagtgagtttctgtgcgtcgatgggcagaagtatgctgtggtcgggacggtgctgctg
ctgatccggatgtttctggagtactgccagtgtgtgaatgacattccctccatcaccact
gacatcctcacgcgcctcaccgacctgctcaagcacttcaactctcgaagctgtcagcta
gtgctgggggcgggagctctgcaggtggtgggcctgaaaaccatcactaccagaaacctg
gctctggcatctcgctgtcttcagctggtggttcactacatccctgtgatccgagcgcac
ttcgagaccagactgcagcccaaacagtatagcgtcctgcgccacttcgaccacatcacc
aaggactacaacgatcacatcgcagagatctctgccaaactagtggccatcatggacagc
atgttcgagaaggctctgtctaaatatgaggtgaaggcgccgatgccgtcagcgtgtttg
cgtaacgtgtgtaaacagatggccaaaatgcacgaggctatttatgagctcttgccagag
gagcagacgcagatgctgttcctcaggataaacgccaggtttaatctgcatctgaagcgg
cagttggctcgattaggggtcatcaatgatggcggaccccagaatgggttggtgatggtg
gacgtggcgttttactctgagaacgttcaggctttgcgctctctggagtgtttggactta
aacatgccggagatctgggagcagaaaaggtga
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integrated database retrieval system
