Ctenopharyngodon idella (grass carp): 127524891
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Entry
127524891 CDS
T08802
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03430
Mismatch repair
cide03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127524891
03460 Fanconi anemia pathway
127524891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127524891
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
127524891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
127524891
NCBI-ProteinID:
XP_051772882
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Position
13:4030055..4037502
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AA seq
718 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKATNIQITVKEGGLKLILIQD
NGTGIRKDDMEIVCERFTTSKLQSFEDLASIATYGFRGEALASISHVAHVTITTKAADAK
CAYRASYSDGKLKSPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIIEVVSRY
AIHNSGKSFAVKKQGEMVADVKTLINASVLDNIRVVFGVAVSRELIEVECEDQKLAFKMK
GYISNANYSVKKCVLILFINHRLVESAALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNI
DVNVHPTKHEVHFLHEDSIIESIQKHIESKLLGSNSSRTYFTQTLLPGLSASASVVKASS
SLADSQERIYAHQMVRTDSKAQKLDAFLQPSTSSSTAQCKSDKTSSPPTAEPDDTELLNA
VDDLEPCGSEDPPTDIQPSTDEAPPRKRPHVEEVKEDLTAACLPRRRVIKLTSIKELREE
IEQQTHKGLQELLQNHSFVGSVSPQWTLVQHQTKLYLLNTTKFSQELFYQILIYDFGNFG
VLRLSNPAPLYDLAMLALDSEESGWTDEDGPKEGLAQYIVDFLKQKSEMLEEYFSLEIDG
EGNLTGLPMLLNNYTPAMEGLPMFILRLATEVNWDREKDCFHDFSIECSHFYSIRKRYTL
EPDAEEPQDAEMSWQWKVEHVLFKALRSLFSPPKHFSEDGSVLQIASLPELYKVFERC
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagtcatccgcagactcgatgagactgtagtgaaccgcatcgcagcaggagag
attatccagcggcctgccaatgctatcaaagagatgatggagaactgtttggatgcaaag
gccacaaatatccagataacagtgaaagaaggcggactgaagctcatcctcattcaggac
aatggcactggcatcaggaaagatgatatggaaatagtttgtgaacgttttacgaccagc
aagcttcagtcttttgaggacttggcatcaatcgcaacatatggattcagaggcgaggct
ctcgccagtataagtcatgtagcccatgtcacaatcaccacaaaagcagctgatgcaaaa
tgtgcctacagggcaagttacagtgatgggaagctaaaatctccacccaaaccttgtgct
ggaaaccaggggacattgatttctgtagaggatctgttctataatgtgtccacccgacgg
aaagccctgaagagccccagtgaggaatattctagaatcattgaggttgtgagcagatat
gccattcacaactctgggaaaagttttgctgtaaagaagcaaggcgagatggttgcagat
gtcaagacccttataaacgcctctgtgctggacaacattcgtgtggtgtttggtgtagct
gttagcagggagctgattgaagttgagtgcgaggatcagaaactcgcttttaaaatgaag
ggttacatctccaatgccaactactctgtcaagaaatgtgtccttatcctttttatcaac
catcgcttggtggagtctgctgccttgaagaaagctattgagactgtctacactgcttac
cttcccaaaaacactcatccttttctttatcttagtttagagattgctcctcaaaacatt
gacgtgaatgttcaccccaccaagcacgaggtgcacttcctgcatgaggacagcatcatc
gagagcattcagaaacacattgagagtaaactgcttggctctaactcctcacgcacgtac
ttcacacagactctgcttccaggactttcagcatctgccagtgtggtgaaagcctccagt
tccttagcggattcccaggagcgcatatacgcccatcagatggtccgcactgacagcaaa
gcccagaagctggatgcgtttctccagccatcaacctcttcgtctaccgcgcagtgcaag
tcagataaaacctccagcccccccactgccgagccagacgacacagagctgctgaatgct
gttgacgatctggagccatgtggctcagaggatccaccaacagacattcaaccttccact
gatgaagcaccaccaaggaaaaggcctcatgttgaggaggtgaaggaggatttgacagcc
gcctgtcttcccaggagacgcgtcattaaactcaccagcataaaggagcttcgggaggaa
attgagcagcaaactcacaaaggtttacaggagctgctccagaatcactcatttgtgggt
tcagtcagtcctcaatggactctagtgcagcaccagacgaaactctatctgctcaataca
accaaattcagtcaggagctgttttatcaaattttgatctacgattttggtaactttgga
gtccttcgattgtcgaatccagctccgctctatgatttggccatgttggctctagattca
gaggagagcggatggacggatgaggacggaccaaaagaaggactggcccagtatattgtg
gatttccttaagcagaaatcagaaatgctggaagagtacttttccctggaaatagatgga
gaagggaacctgactggtctgccaatgctgctcaataattacactcctgccatggagggt
cttccgatgttcattctgcgtttagccactgaggtgaactgggatcgagaaaaggactgt
ttccatgacttcagcatagaatgcagtcacttctattccataaggaaacgctacacactg
gagccggatgcagaagagccgcaggacgcagagatgagctggcagtggaaggtggagcac
gtgcttttcaaagctctccgctctctcttcagtcccccgaaacacttcagtgaagatggc
agcgttctccagatcgccagcctgcctgaactctacaaagtgtttgaaagatgctga
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