Ctenopharyngodon idella (grass carp): 127524895
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Entry
127524895 CDS
T08802
Name
(RefSeq) lymphoid-specific helicase isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127524895
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127524895
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Shugoshin_C
Motif
Other DBs
NCBI-GeneID:
127524895
NCBI-ProteinID:
XP_051772891
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Position
13:3784078..3795798
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AA seq
853 aa
AA seq
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MSGIVKEETRSVSPHCPKPNESEEPEGTAMEETTMEKSQPGDMVITKEMEEEEKLLVEEG
EKKEREMMEEARQSWEKDSQEMRFKRLQHLLEKSNIYSKFLLTKMEQQQQEEKLKKERLE
KKAASQKQKGNDKKTVKVERKKREREDYKIADVMSKEEILSKAKKPKMEEEAHTSVKLEA
EDIEKLSDTNSDIKGRLSETLRENSKQMLDPDRTVNGQPVPAQQPKLFTGGVMRWYQVEG
IEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMVEKKVLGPFLVVAPLSTLPNWISEF
KRFTPEVSVLLYHGPQKERMNLVKKIRQHQGPLRMCPVVVTSFEIAMRDRKFLQRFHWNY
LIVDEGHRIKNLNCRLVQELKMLPADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKS
FESWFDISTITSDAENIMASEREQKILHMLHQILTPFLLRRLKSDVTLEVPPKKEIVVYA
PLTNKQEAFYMAIVNKTIAKMLGQEKDDSGPVQLTSSGRPKRKTRKVVDYTEKDTDSMKD
LEKYLEKVQKEMESQESPSPVMDVFVPVDAQINLKLQNILMLLKRCCNHAYLIEYPLDPT
TGDFKIDEQLVEASGKFLILDRMLPELKKRGHKVLIFSQMTSILDILMDYCYLRGYEYSR
LDGSMSYADRDENMKKFAADPEVFLFLLSTRAGGLGINLTAADTVIIFDSDWNPQADLQA
QDRCHRIGQTKPVMVYRLITANTIDEKILERASAKRKLEKMVIHKNKFKGSKAELKQTKS
CMDVNELVELLKSRDYDGAVKGTKGKVISDKDLEILLDRSDLTNQAKKRMKQEKDRVFKV
IETKDDNADIILS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcattgtcaaagaagagacacgcagtgtttcccctcactgccccaaacctaat
gaatccgaagagccagaaggtactgcaatggaagagaccactatggaaaaaagccagcct
ggagacatggttattaccaaagagatggaggaggaggagaagcttttagtggaggaggga
gagaagaaagagagagaaatgatggaggaggccagacagtcgtgggaaaaagattctcaa
gagatgcgatttaaaagacttcagcaccttttggagaaaagcaacatttactcaaagttt
ctgctcacaaagatggaacagcagcagcaagaggaaaaacttaaaaaagagagactggaa
aagaaagctgctagtcagaagcaaaagggcaatgataaaaagactgtaaaagttgagaga
aagaagcgtgaaagggaggattacaaaatcgcagatgttatgtccaaagaggaaattctg
tcaaaagccaaaaaaccaaaaatggaagaggaggcacatacatcagtaaaactggaagct
gaggatatagagaagctgagtgacacaaactcagatattaaaggcaggctgtctgagact
ttgcgggagaacagcaagcagatgctggatccagacagaaccgtgaacggccaaccggta
cctgcacagcaacccaaactcttcactgggggtgtgatgaggtggtaccaggtggaaggc
atagagtggctcaggatgttatgggagaatggtattaatggtatcctggctgatgagatg
ggtcttgggaaaaccatacagtgcattgctcatattgccatgatggtagagaaaaaggtc
cttgggcctttcttagttgtggctcctttgtccactcttcccaactggatatccgaattt
aaacgcttcaccccagaggtgtccgtcctgctgtatcatggtcctcaaaaagagaggatg
aacctggtgaaaaagatccgtcagcaccagggtcccctcagaatgtgccctgttgttgtt
acatcctttgaaattgccatgagagaccggaaatttcttcagcgtttccactggaactat
ctgattgtggatgagggccacaggattaaaaacttgaactgtcggctggtgcaagagctg
aagatgctgccagctgacaacaaactgctgctgacaggaacccccctgcagaataacctg
tctgaactgtggtctctcctcaacttcctccttccagatgtgtttgatgacctgaaaagt
tttgagtcatggtttgacattagcaccatcacttcagatgcagaaaatattatggctagt
gagcgagagcagaagatccttcacatgcttcatcagatcctcacccccttccttctgaga
agactgaagtcagatgtcacactggaggttccacctaagaaagagattgttgtgtacgca
cccctcaccaacaaacaggaggccttttacatggccattgttaacaagactattgcaaag
atgctgggtcaggagaaggatgattcgggacctgtgcagctgacgtccagtggccggcca
aaacgcaagaccaggaaggtggtggactatactgaaaaggacactgactctatgaaagac
cttgagaaatatctagagaaagttcagaaagagatggagagtcaggaaagccccagccca
gtgatggatgtgtttgtgccggttgatgctcaaatcaacttaaaactgcagaacatactg
atgctgctgaagaggtgttgcaaccatgcttacctgatagagtatcctctggaccccacc
actggagacttcaagattgatgagcagttagtggaagcatcagggaagtttctcatcctg
gatcgaatgcttcctgaactgaaaaaaagagggcacaaggtgctgattttcagccagatg
acctccatattggatattctgatggattattgttatctccggggttatgagtacagccga
ctggatggctcaatgagttacgcagaccgagatgagaatatgaagaagtttgctgctgat
ccagaggtgttcctcttcctcctgagcactcgagctggtggtcttgggatcaacctcaca
gctgctgacacggtcatcatatttgacagtgactggaatcctcaggcggatttgcaggca
caggatcgctgtcaccgtatcgggcaaacaaagcctgtaatggtttaccgccttattacg
gccaacaccattgatgagaagatcctggagagagcctccgccaagagaaagctagagaag
atggtcattcacaaaaataaatttaaaggttctaaagcagaactcaaacagaccaagagc
tgcatggatgtaaatgagcttgtagaactgctgaagtccagagactatgacggggcagtg
aaaggcactaaaggaaaggtcatcagtgacaaagatctggagatcctgctggaccgcagt
gatttaacaaatcaagccaaaaagcgtatgaaacaagagaaggacagggtgtttaaagtt
attgagaccaaagatgacaatgctgacatcattctgtcctga
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