KEGG   Ctenopharyngodon idella (grass carp): 127524904
Entry
127524904         CDS       T08802                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127524904
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cide01009]
    127524904
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cide03021]
    127524904
Protein phosphatases and associated proteins [BR:cide01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127524904
Transcription machinery [BR:cide03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     127524904
    Little elongation complex (LEC)
     127524904
SSDB
Motif
Pfam: ELL Occludin_ELL Snapin_Pallidin
Other DBs
NCBI-GeneID: 127524904
NCBI-ProteinID: XP_051772905
LinkDB
Position
13:complement(1264575..1282336)
AA seq 660 aa
MMAALCEDGRYGLNCGRKSDRISVLHVKLTESAFKALENYQNCKNAPSSQATIRFQGLQG
RIKIPTTDASDGSHNFDFYLSNFGKDNPQGSFECIHQYISNSGVPHLSSQGTIQDKITVC
ATNDSYQVTKVRVTKAEEDKGKNSTKFIKPGGPFRDKKVQHRKPAPSAPDPVPERKQTTP
LNPANTIRKCLTNNPVSQRPYRDRVIHLLALRSYKKLEVLARLQRDGVSQKDRNSLGTTL
HQVANLNPKDNSYSLKDFIFREVQRDWPGYTEDERVQVDRILARKLGLNSESVSSSSPTK
EPTSPLKRQPEIDFIDPLMPKKPRISHLSNRGPSSSSGRHPSEAEDKKNAPKAACPGPSF
HPPPVTGSSSNSPSTPEGRGSQDLPLDQSSICGNSAESYAPRSHTPSPPSQPVSTTSPSS
FSTCTVSTTTITSTTTTSSGHHVSSAASPTASRDGNGSKKPKKSKKHKDKERKREGEREM
DKDKDRKRDRAHRREDHCDKEAQPRKKHRNEAEHKHIPANISHESDKEAGKDKPVNSTEL
PVPTKPDYIVKYTAVISMDQRQHYKDDFNAEYDEYRILHARVESVTRRFTKLDAQCRRLA
PGTKEYQEVHEQVLQEYKKIKQHSPKYYEEKQRCEYLHNKLAHIKRLIADFDQRRAQSWL
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgatggcagctctctgcgaggatggcagatatggactcaattgtggccgcaagagcgac
agaatatcagttttacatgtcaaactgacagaatcagcctttaaagcgctagaaaactac
caaaactgtaagaatgcaccatcctcacaggcgacgatacgttttcagggtcttcaaggg
cgcattaaaatcccaacgacagatgcttctgatggctctcataacttcgacttttatctg
tccaacttcggcaaagacaatcctcaaggaagctttgagtgtatccaccagtacatatct
aactctggagtcccccatctgtcctcccagggaacgattcaagacaaaatcacagtatgt
gccaccaatgactcctaccaggtgaccaaagtacgcgtgaccaaagcagaggaggataaa
ggcaagaacagcaccaaattcatcaaacccggaggaccattcagagacaaaaaagtccag
caccgaaaaccggccccctcagcccctgacccggttccagagaggaagcagaccactccc
ctcaatccagccaacaccatccgcaagtgccttaccaacaaccccgtatcgcagcggccg
taccgggaccgcgtcattcacctccttgccctgcgctcctacaagaagctagaggtgctc
gccagactgcaaagagacggcgtcagccagaaagaccgcaactctttgggtactacacta
catcaggtggccaatctaaaccctaaggataactcgtattcgctgaaggactttatcttc
cgtgaggtccagagggactggccgggctatacggaggatgaacgggttcaggttgacagg
atcctggcacggaaattgggcttgaattcagagtctgtctcatccagcagtccaaccaaa
gagccaacatccccactgaaacgccaacctgagatagacttcatcgaccctctgatgcct
aagaagccccgaatctcccacctcagtaaccgaggaccttcctcctcatctggtcgtcat
ccttcggaagctgaggacaaaaaaaacgcacccaaggccgcctgccctggaccctctttt
caccctccccctgtcaccggctctagttcaaactcccccagcacgccggagggccggggg
tcacaggatctgcccctggaccagagctctatatgtgggaactccgcggagagctacgcg
ccccgcagccacacgcctagcccacccagccaaccagtttccacaacttccccctcatcc
ttctccacttgtactgtctcgacaaccaccatcacctccaccactaccaccagcagtggc
caccacgtttcctctgccgcgtctcctacagccagccgtgacggcaatggcagcaaaaag
cccaagaagtccaagaagcacaaagataaagagaggaagcgagaaggagagcgagagatg
gataaggataaggaccggaagagggatagagcgcatcgcagggaggatcactgcgacaag
gaagcacagcctagaaagaaacaccggaatgaggcggaacataaacacattcctgccaac
atcagccacgaatcagacaaagaagctggcaaagacaagcctgtcaacagcactgaactt
ccagtcccaacaaagcctgattacatagttaagtacactgcagtgatatctatggatcag
aggcagcactataaggatgacttcaatgcagaatatgatgaatatcgtatccttcatgcc
cgcgttgagagcgttacgcgtcgttttacaaaactggacgcccagtgtaggcggctagca
ccaggaactaaagagtaccaggaagtacatgaacaggtgctgcaagaatacaaaaaaatt
aaacaacacagcccaaaatactatgaagaaaaacagcgctgcgagtacctgcacaacaaa
ctggcccacatcaaaaggctcattgctgacttcgaccagcggagggcgcagtcctggctg
tag

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