| Entry |
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| Name |
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
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| KO |
| K25207 | zinc finger SWIM domain-containing protein 8 |
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| Organism |
cide Ctenopharyngodon idella (grass carp)
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| Brite |
KEGG Orthology (KO) [BR:cide00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:cide04121]
127524931
Ubiquitin system [BR:cide04121]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
127524931
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
13:7595284..7633108
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| AA seq |
1952 aa
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKE
ESHTGLKQHEDGQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEED
IRLYSCLANGSPDEFQRGEQLYRVRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFD
RCRITSCSCTCGAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYL
ISELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIK
KTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFK
RRDSNAAPLLEILTEQCLTHEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASM
CDEMVVLWRLAVLDPTMSPQRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAV
ESCYFNWEVAYPLPGITYCSADKKNASFCWARAVQQQRGIKAGASGESGEGARGGMSEGT
SSEHKSRSNSHLPQQEVAVRPKETIVSKRKGVSGVSSGGVLVCLGGRVSLSLQEGGKGMY
KASSSSPSAGSKAKLTQSNKGSCGSSSGVSGKHPGAKRRTSSEDSSLEPDMAELSLDDGS
SLALGAEACNTFDFLPPPPEMLPSPSPLLREPLKYSSGNVSKERAFETKHVAHAAMPSAA
DAHACFSKESSIATPVVVAMEKEMEVEADLDETGGDEDPVDDTRPCASLPSKAQRGRREG
DGSGASGAPGPQAAEAAAGADAVGEDDYQAYYLSAASEEGADRGVADGNHEDEPDIFAGI
KPLEQEGRMEILFACAEALYAHGYSNDACRLAVDLARDLLANPPDLKVEQPQTKGKKSKV
STSKQTQVATNTLSKVAFLLTVLSERLELHNLAFNTGMFSLELQRPPASTKALEVKLAYQ
ESEVVALLKKIPLGLVEMTSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPT
GSRPPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMIT
YKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPATSSQKSPSKHATHGASGATGGVS
KHNPSATSAAVQGVTGGGAAGQQGGLAAGGVQNTATGEGISDNRDQEGAQSTSCEQQSEA
APFKPEGTVPSRLALGGRGAYGTRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRR
PLRGGWTAASWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKGRRPEC
HAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEI
GLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLAD
RASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAK
GGGVYPEVLFEVAHQWYWLYEQTVGGGSGSQREGSGRCGANGGAGRTAPEGGCGILDNTG
ALDSTGVAAVTTTVTAAAVVPVISVGSTIYQSHALPGSAMAHTAGLHPYTTIQTHLPTVC
TPQYLGHSLQHVPRPAVFPVSGAAYPQVYDSRKAYQAGFKSICLSSQGMHPAFIGAQYPF
SVATGPHPPMAATAVTFPGVPVPSMTQIAVHPYHTAEAALPLSTTVAAGGVHSGSTIQAI
QGPSLPGLSSQPASLVSAPFPVEDEQHSQPISQQGLHYLHSAYRVGMLALEMLGRRAHND
HPNNFSRSPPYTEDVKWLLGLAARLGVNHVYQFCVGAAKGVLSPFVLQEIIMEALQRLNP
AHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPADYDDFVNIIRSARGAFCLTPVGM
MQFNDVLQNLKRGKQTKELWQRISLEMATFSP |
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| NT seq |
5859 nt +upstreamnt +downstreamnt
atggaactgatgttcgctgagtgggaagacggagagaggttctcctttgaagattcggac
cgttttgaggaggactccctgtgctcattcatatcagaggcggaaagcctctgccagaac
tggagaggatggaggaaacagtctgccggcccaaattcacccactgtgaagattaaagaa
gaaagtcatacaggcttgaaacaacacgaggatggacaagtcatccctttggtggagctg
tcggccaagcaggtggcattccatattccgttcgaagtagtggaaaaggtctatcctccc
gttcctgagcagctccaattgcggatcgcctactggagctttccagagaacgaagaggat
atcagattatactcttgtttggccaatggcagccctgatgagttccagcgtggtgagcag
ctctatagagtgagagctgtgaaagaccctctgcagataggtttccacctcagtgccaca
gtagtgtcgccccaggccggccaatcaaaaggagcctacaatgtggctgtaatgtttgac
cgctgccgcatcacttcctgtagctgcacctgtggagcaggagccaaatggtgtgcccac
gttgtggccctctgcctcttcagaattcacaatgcttctgcggtgtgtcttcgagcacct
gtgtcagagtccctgtccagattacagcgggatcaactccagaagtttgcacaatacctc
atcagtgaactcccacagcagatcttgccgacagctcagcgtcttttggatgagcttctt
tcctcccagtctacggctattaacaccgtgtgtggagccccggatcctactgctggccct
tcagcctctgaccagagcacttggtatctagatgagtccaccctcagtgacaacataaag
aagaccctgcacaagttttgtggcccctcaccagttgtgtttagtgatgtgaactccatg
tatctgtcgtccactgagcctccggcagctgctgaatgggcttgtttgctgaggcccctg
cgaggtagagagccagagggcatctggaaccttctgtccatcgtcagagagatgtttaag
aggagagacagcaacgctgcgcctctgttagagatcctcaccgaacagtgtctcacccac
gaacagatcattggttggtggtacagtgtaaggacatctgcctctcacagcagtgccagc
gggcacacaggtcgtagtaatgggcagacagaggtcgcagcacatgcatgtgccagtatg
tgtgatgagatggttgtcttatggagactggcagtgctagaccctaccatgagtccccag
aggcgcttggagctcgccgcccagctgaagcagtggcacctgaaggtaatagagatcgtt
aaacgagggcagcaccggaagtctctggacaaactcttccagggcttcaaaccagctgtt
gagtcctgctacttcaactgggaagtggcctaccctttacctggcatcacctattgcagt
gcagataagaaaaacgcctcattttgttgggccagggcagtgcagcagcagcggggcatt
aaagcaggggccagcggggaatcaggagaaggagctcgtggtggaatgtcagaaggtact
tcgtctgaacacaagtcaaggagcaactcccatcttccccagcaggaggtggctgtccgc
cctaaggagaccattgtgagcaagaggaaaggagtgtctggcgtgagcagtggaggtgtg
ctggtttgtctgggtggcagggtctctctctcacttcaggagggaggtaaaggcatgtat
aaagccagcagctcctccccatcagctggtagtaaggccaagctaacgcagagcaacaag
ggctcgtgtggaagttcgagtggcgtcagtgggaagcaccctggcgcaaagcggcgaacc
agcagtgaggacagctctttagagcctgacatggcagagctgagtctggatgatggctcc
agcctggcgctcggggcagaggcctgcaacacctttgatttccttcctcctcctcccgag
atgttgccttcacccagcccgctgctccgtgagccactcaaatacagcagtggtaacgtt
tcaaaagagcgcgcctttgagacgaaacatgtggcgcatgctgccatgccctctgctgct
gatgcccatgcctgcttttcaaaggagagctccattgcaactccagtagtggtagctatg
gagaaagagatggaggtggaggcagacctggatgagaccggaggagacgaggaccctgta
gacgatactcggccctgtgcttcgctccccagcaaggctcagcggggccgcagagaggga
gatggaagcggggcttcaggggccccaggacctcaggcggctgaggcagcagcaggcgca
gatgctgtgggggaagatgactatcaagcctactatcttagcgctgcctcagaagaggga
gcggatagaggggttgcagatggcaaccatgaggacgagccagacatctttgctggaatt
aaacctctggagcaggagggcaggatggagatactgtttgcttgtgctgaggctctctac
gctcacggctacagtaatgacgcttgccgactggctgttgatcttgctcgagatcttctg
gctaatccgcccgacctgaaggtggagcagccacagacaaagggtaaaaagagtaaggtg
tcgaccagtaaacagacgcaggtggccactaacaccctgtctaaagtagcctttctgctg
actgtgttgagtgagaggctggagctccataacctggccttcaacactggcatgttctcc
ctagagcttcagagaccaccagcttctactaaagctctggaggtgaagctggcatatcag
gagtcagaggtggtggctctcctgaagaagattccactgggtcttgtagaaatgacttcc
ataagggaccgagcggagcagcttcgtgatggaaacttctgcgactatcggccggttctg
cctctcatgctggcaagcttcatatttgacgtactctgcacccctgtggtctctcccacg
ggctctcgacctcctagccggaaccgtaataatgaaatgcctggtgatgaggagctggga
tttgaggctgctgtagcagctcttggtatgaagacaacggtcagtgaggcagagcatcct
ttgctatgtgaaggcacacggagagagaaaggagacttggctctagcactaatgatcacc
tataaagatgatcaaagcaagcttaaaaagattctggacaaactccttgaccgtgagagc
cagacccataagcctcagactctgagctcattttactctagcaaaccagctaccagcagc
caaaagagcccatccaaacatgccacccacggtgccagcggagccacggggggagtgtca
aagcacaacccttcagcaacatcagccgctgtgcagggtgtgactggcggcggagcggcg
ggacagcagggaggtttagcggctggtggagttcagaacacagcaacgggagagggcatc
tctgacaacagagatcaagagggtgcgcagtcgacctcctgtgagcagcagagcgaagct
gcacctttcaagcctgagggcaccgtgcccagtcgtctggcactggggggccgcggggca
tacggcacacgctgctggggatcacctgtacggcagaaaaagaaacacactggcatggcg
agcattgacagtagcgctccagagaccacctcagacagctctcctactctcagtcgacgt
ccacttcgaggaggttggacagctgcttcctggggtagaggccaggacagtgacagcatt
agcagctcttcctctgattcactgggctcatcttcatctagcggctcacgcagagctgga
ggaggagccagagcaaagagtactgacaccagcaggtataaaggccgccggcctgaatgt
catgctccacacgtgcccaaccagccatctgaggcagctgcccatttttactttgagctg
gccaagactgtgttgattaaagctggaggaaacagctccacctccattttcactcaaccc
tctgccagtggaggtcaccaggggccccaccgcaacctgcatctgtgtgcctttgagatt
ggcctgtatgccctcggcctgcataattttgtgtctcctaactggctgtcaaggacgtat
tcttcacatgtatcctggattacaggccaggccatggagattgggagtgctgccctcaac
atcctggtggaatgctgggatgggcatctcacgcctccagaggtggcatcactcgcagac
cgcgcatcacgagcacgggatcccaacatggttcgtgctgcggcagagctggccttgagc
tgcctgccacacgctcatgccctcaaccccaacgagattcagagagctctggtgcaatgc
aaggagcaggataatgtgatgctggagaaagcttgcatggcagttgaggaagctgcaaag
ggaggcggtgtatatcctgaggtcttgttcgaggtggctcaccagtggtattggctgtac
gagcaaacagtgggtggtggttcggggtcccagcgagagggttccggccgctgcggggcc
aatggtggagcagggagaacggcacccgagggaggctgcggtatcctggataacaccgga
gccttggattcaacaggtgtcgcagctgttactacgacagtgacggcagccgctgtagta
ccggtcatttccgtcggctccaccatataccagtcgcatgctctgccaggctcagccatg
gcgcacacggcaggcctgcatccctacaccaccatccaaacccatctgcccaccgtctgc
accccacagtacctgggacactcgcttcagcatgtcccccgtcctgctgtcttccccgtg
tctggggcggcctacccacaggtatatgactcgaggaaggcgtatcaagctggttttaag
agcatctgtttgtcttctcagggaatgcaccctgcttttattggtgctcagtacccgttt
tctgtggccactggccctcatcctcctatggcagcgactgctgtcactttccctggcgtt
ccagtgccgtccatgactcagatcgctgtccacccataccatactgcagaggcagccctg
cctcttagcactactgtggcagcaggaggagtacactcaggctccaccatccaggccatt
caggggccttctcttccaggactctcgtcccagcccgcctcactggtcagcgcaccattc
cctgtggaagacgagcagcacagtcaaccaatcagccagcagggcctgcactacctccac
tcggcctatagagtcggcatgctggccttggagatgttgggaaggagggcccacaacgat
catccgaacaacttttcccgtagccccccatacacagaagacgtcaaatggctgctggga
ctggctgcgcgtcttggtgtgaaccacgtgtaccagttttgtgtgggggcagccaaaggt
gttcttagtccatttgtcctgcaggagatcattatggaggctctgcagaggttaaaccct
gcacatatccacgcacacctccgcactcctgccttccaccagctcgtgcagcgctgccag
caggcctacttacagtatatccaccacaggctgatccatctgactcccgcagactatgac
gactttgtgaacatcatccgaagtgcccgcggggcgttttgcctgacgccagttggcatg
atgcagttcaacgatgtgctgcagaacctgaagaggggcaaacagacaaaagaactatgg
cagcggatctcgttggagatggccaccttctcaccatga |
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